CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI4G39130
(
Brachypodium distachyon
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
BRADI4G39130
T082034_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI4G39130.1
C2H2 ZF
1376
1399
FSCDIEGCDMSFSTQQDLLLHKRD
BRADI4G39130.1
C2H2 ZF
1429
1453
LKCTFEDCKKTFKWPWAKTEHMRVH
BRADI4G39130.1
C2H2 ZF
1459
1485
YKCKEPGCTQTFRFVSDFSRHKRKTGH
Links
Other
C2H2 ZF
family TFs
Other
Brachypodium distachyon
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA036374
Oryza indica
BGIOSGA036374
N
0.788
OMERI12G06120
Oryza meridionalis
OMERI12G06120
N
0.788
OPUNC12G07790
Oryza punctata
OPUNC12G07790
N
0.788
ORGLA12G0080500
Oryza glaberrima
ORGLA12G0080500
N
0.788
OS12G0279100
Oryza sativa
OS12G0279100
N
0.788
ORUFI12G09490
Oryza rufipogon
ORUFI12G09490
N
0.788
OLONG_018459
Oryza longistaminata
OLONG_018459
N
0.788
ONIVA12G08260
Oryza nivara
ONIVA12G08260
N
0.788
OGLUM12G09840
Oryza glumaepatula
OGLUM12G09840
N
0.788
OBART12G08590
Oryza barthii
OBART12G08590
N
0.788
LPERR12G07400
Leersia perrieri
LPERR12G07400
N
0.788
OB12G17360
Oryza brachyantha
OB12G17360
N
0.784
Pavir.J05247
Panicum virgatum
Pavir.J05247
N
0.771
TRIUR3_21570
Triticum urartu
TRIUR3_21570
N
0.767
Traes_5DS_976CBF9EB
Triticum aestivum
Traes_5DS_976CBF9EB
N
0.767
F775_01850
Aegilops tauschii
F775_01850
N
0.767
MLOC_55909
Hordeum vulgare
MLOC_55909
N
0.767
Traes_5AS_7E3208FD4
Triticum aestivum
Traes_5AS_7E3208FD4
N
0.767
Traes_5BS_23717182B
Triticum aestivum
Traes_5BS_23717182B
N
0.767