BRADI5G08537 (Brachypodium distachyon)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 BRADI5G08537 T082036_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
JKD
M06818_2.00 		Arabidopsis thaliana
HHNWWTTTTGTCKTTTWBYD
HRVWAAAMGACAAAAWWNDD		 Dap-seq
OMalley et al.(2016)
JKD_col_a 		0.768 0.878
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI5G08537.1 C2H2 ZF 142 163
BRADI5G08537.1 C2H2 ZF 164 188

Links

Other C2H2 ZF family TFs
Other Brachypodium distachyon TFs

157 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_4BL_38E55D7B4 Triticum aestivum Traes_4BL_38E55D7B4 I 0.807
GRMZM2G320287 Zea mays GRMZM2G320287 I 0.802
LPERR02G14730 Leersia perrieri LPERR02G14730 I 0.802
OB02G26130 Oryza brachyantha OB02G26130 I 0.802
Sb04g021440 Sorghum bicolor Sb04g021440 I 0.802
TRIUR3_32694 Triticum urartu TRIUR3_32694 I 0.802
Pavir.Aa01904 Panicum virgatum Pavir.Aa01904 I 0.802
Traes_4DL_DF1F43E16 Triticum aestivum Traes_4DL_DF1F43E16 I 0.802
OBART02G18320 Oryza barthii OBART02G18320 I 0.802
OGLUM02G18620 Oryza glumaepatula OGLUM02G18620 I 0.802
ORGLA02G0157900 Oryza glaberrima ORGLA02G0157900 I 0.802
ORUFI02G19290 Oryza rufipogon ORUFI02G19290 I 0.802
OS02G0518500 Oryza sativa OS02G0518500 I 0.802
OPUNC02G16560 Oryza punctata OPUNC02G16560 I 0.802
ONIVA02G20290 Oryza nivara ONIVA02G20290 I 0.802
OLONG_013811 Oryza longistaminata OLONG_013811 I 0.802
OMERI02G18510 Oryza meridionalis OMERI02G18510 I 0.802
Traes_4AS_F7A905B43 Triticum aestivum Traes_4AS_F7A905B43 I 0.802
Pavir.Ab01787 Panicum virgatum Pavir.Ab01787 I 0.802
BGIOSGA006371 Oryza indica BGIOSGA006371 I 0.802
BRADI3G44520 Brachypodium distachyon BRADI3G44520 I 0.802
Si019690m.g Setaria italica Si019690m.g I 0.802
F775_04344 Aegilops tauschii F775_04344 I 0.802
PK25985.1 Cannabis sativa PK25985.1 I 0.801
Solyc06g075250.2 Solanum lycopersicum Solyc06g075250.2 I 0.801
Cagra.0635s0013 Capsella grandiflora Cagra.0635s0013 I 0.801
Bostr.2983s0191 Boechera stricta Bostr.2983s0191 I 0.801
Carubv10001008m.g Capsella rubella Carubv10001008m.g I 0.801
PGSC0003DMG400003372 Solanum tuberosum PGSC0003DMG400003372 I 0.801
AtIDD12 Arabidopsis lyrata fgenesh1_pg.C_scaffold_6003159 I 0.801
30128.m008580 Ricinus communis 30128.m008580 I 0.796
GLYMA11G15950 Glycine max GLYMA11G15950 I 0.796
chr5.CM0299.500.nd Lotus japonicus chr5.CM0299.500.nd I 0.786
TCM_041053 Theobroma cacao TCM_041053 I 0.777
Gorai.005G198100 Gossypium raimondii Gorai.005G198100 I 0.777
TCM_008261 Theobroma cacao TCM_008261 I 0.777
Gorai.006G120000 Gossypium raimondii Gorai.006G120000 I 0.777
Solyc11g069240.1 Solanum lycopersicum Solyc11g069240.1 I 0.777
Gorai.004G076800 Gossypium raimondii Gorai.004G076800 I 0.777
Gorai.001G131000 Gossypium raimondii Gorai.001G131000 I 0.777
cassava21529.m1 Manihot esculenta cassava21529.m1 I 0.777
29643.m000323 Ricinus communis 29643.m000323 I 0.777
cassava6007.valid.m1 Manihot esculenta cassava6007.valid.m1 I 0.777
cassava832.valid.m1 Manihot esculenta cassava832.valid.m1 I 0.777
Cucsa.222420 Cucumis sativus Cucsa.222420 I 0.777
Ciclev10028294m.g Citrus clementina Ciclev10028294m.g I 0.777
Eucgr.J00939 Eucalyptus grandis Eucgr.J00939 I 0.777
VIT_09s0054g01820 Vitis vinifera VIT_09s0054g01820 I 0.777
Ca_14587 Cicer arietinum Ca_14587 I 0.777
gene04812-v1.0-hybrid Fragaria vesca gene04812-v1.0-hybrid I 0.777
Cla005124 Citrullus lanatus Cla005124 I 0.777
VIT_06s0004g03070 Vitis vinifera VIT_06s0004g03070 I 0.777
POPTR_0327s00220 Populus trichocarpa POPTR_0327s00220 I 0.777
MTR_4g059870 Medicago truncatula MTR_4g059870 I 0.777
orange1.1g011146m.g Citrus sinensis orange1.1g011146m.g I 0.777
POPTR_0001s12770 Populus trichocarpa POPTR_0001s12770 I 0.777
PGSC0003DMG400008110 Solanum tuberosum PGSC0003DMG400008110 I 0.777
mgf001929m Mimulus guttatus mgf001929m I 0.772
Bo9g021710 Brassica oleracea Bo9g021710 I 0.772
GLYMA12G07510 Glycine max GLYMA12G07510 I 0.772
Bo2g167740 Brassica oleracea Bo2g167740 I 0.772
Lus10007409.g Linum usitatissimum Lus10007409.g I 0.772
LjSGA_017927.1 Lotus japonicus LjSGA_017927.1 I 0.772
Lus10036116.g Linum usitatissimum Lus10036116.g I 0.772
orange1.1g008017m.g Citrus sinensis orange1.1g008017m.g I 0.771
Ciclev10007837m.g Citrus clementina Ciclev10007837m.g I 0.771
Eucgr.B03566 Eucalyptus grandis Eucgr.B03566 I 0.771
Thhalv10013267m.g Eutrema salsugineum Thhalv10013267m.g I 0.768
Ciclev10019959m.g Citrus clementina Ciclev10019959m.g I 0.768
SapurV1A.5138s0010 Salix purpurea SapurV1A.5138s0010 I 0.768
Thhalv10028701m.g Eutrema salsugineum Thhalv10028701m.g I 0.768
Ciclev10011592m.g Citrus clementina Ciclev10011592m.g I 0.768
Carubv10000736m.g Capsella rubella Carubv10000736m.g I 0.768
Cagra.1597s0004 Capsella grandiflora Cagra.1597s0004 I 0.768
LjT03L03.50.nd Lotus japonicus LjT03L03.50.nd I 0.768
SapurV1A.0209s0070 Salix purpurea SapurV1A.0209s0070 I 0.768
Bostr.2128s0141 Boechera stricta Bostr.2128s0141 I 0.768
chr1.CM0322.120.nc Lotus japonicus chr1.CM0322.120.nc I 0.768
Aquca_049_00144 Aquilegia coerulea Aquca_049_00144 I 0.768
PK18288.1 Cannabis sativa PK18288.1 I 0.768
evm.TU.supercontig_52.117 Carica papaya evm.TU.supercontig_52.117 I 0.768
MDP0000122321 Malus domestica MDP0000122321 I 0.768
MDP0000243664 Malus domestica MDP0000243664 I 0.768
MDP0000480293 Malus domestica MDP0000480293 I 0.768
Aquca_027_00051 Aquilegia coerulea Aquca_027_00051 I 0.768
Gorai.006G167600 Gossypium raimondii Gorai.006G167600 I 0.768
Gorai.008G002200 Gossypium raimondii Gorai.008G002200 I 0.768
Gorai.007G139800 Gossypium raimondii Gorai.007G139800 I 0.768
MDP0000688613 Malus domestica MDP0000688613 I 0.768
MDP0000826293 Malus domestica MDP0000826293 I 0.768
Gorai.009G418600 Gossypium raimondii Gorai.009G418600 I 0.768
evm.TU.supercontig_45.59 Carica papaya evm.TU.supercontig_45.59 I 0.768
SapurV1A.0112s0130 Salix purpurea SapurV1A.0112s0130 I 0.768
SapurV1A.0006s1510 Salix purpurea SapurV1A.0006s1510 I 0.768
orange1.1g011807m.g Citrus sinensis orange1.1g011807m.g I 0.768
orange1.1g011334m.g Citrus sinensis orange1.1g011334m.g I 0.768
gene09703-v1.0-hybrid Fragaria vesca gene09703-v1.0-hybrid I 0.768
Eucgr.A01159 Eucalyptus grandis Eucgr.A01159 I 0.768
Pm001002 Prunus mume Pm001002 I 0.768
PGSC0003DMG400001747 Solanum tuberosum PGSC0003DMG400001747 I 0.768
GLYMA19G36430 Glycine max GLYMA19G36430 I 0.768
GLYMA13G20231 Glycine max GLYMA13G20231 I 0.768
GLYMA10G05880 Glycine max GLYMA10G05880 I 0.768
PGSC0003DMG400010478 Solanum tuberosum PGSC0003DMG400010478 I 0.768
POPTR_0002s04880 Populus trichocarpa POPTR_0002s04880 I 0.768
Solyc10g084180.1 Solanum lycopersicum Solyc10g084180.1 I 0.768
Solyc09g007550.2 Solanum lycopersicum Solyc09g007550.2 I 0.768
POPTR_0016s08990 Populus trichocarpa POPTR_0016s08990 I 0.768
POPTR_0006s13130 Populus trichocarpa POPTR_0006s13130 I 0.768
GLYMA10G03541 Glycine max GLYMA10G03541 I 0.768
GLYMA03G31390 Glycine max GLYMA03G31390 I 0.768
Bo2g100660 Brassica oleracea Bo2g100660 I 0.768
Bo2g003880 Brassica oleracea Bo2g003880 I 0.768
JKD Arabidopsis thaliana AT5G03150 D 0.768
AMTR_s00007p00061550 Amborella trichopoda AMTR_s00007p00061550 I 0.768
Bo9g183170 Brassica oleracea Bo9g183170 I 0.768
Bra005741 Brassica rapa Bra005741 I 0.768
JKD Arabidopsis lyrata fgenesh2_kg.6__219__AT5G03150.1 I 0.768
Bra018535 Brassica rapa Bra018535 I 0.768
Bra009549 Brassica rapa Bra009549 I 0.768
TCM_004271 Theobroma cacao TCM_004271 I 0.768
PRUPE_ppa004548mg Prunus persica PRUPE_ppa004548mg I 0.768
30078.m002347 Ricinus communis 30078.m002347 I 0.768
29883.m001956 Ricinus communis 29883.m001956 I 0.768
TCM_022127 Theobroma cacao TCM_022127 I 0.768
Cla018558 Citrullus lanatus Cla018558 I 0.768
cassava20187.m1 Manihot esculenta cassava20187.m1 I 0.768
cassava20362.m1 Manihot esculenta cassava20362.m1 I 0.768
mgf003691m Mimulus guttatus mgf003691m I 0.768
cassava26767.m1 Manihot esculenta cassava26767.m1 I 0.768
cassava24590.valid.m1 Manihot esculenta cassava24590.valid.m1 I 0.768
Ca_17124 Cicer arietinum Ca_17124 I 0.768
AMTR_s00002p00270520 Amborella trichopoda AMTR_s00002p00270520 I 0.768
JKD Vitis vinifera VIT_08s0040g02100 I 0.768
VIT_00s0179g00170 Vitis vinifera VIT_00s0179g00170 I 0.768
MDP0000233477 Malus domestica MDP0000233477 I 0.767
Solyc02g062940.2 Solanum lycopersicum Solyc02g062940.2 I 0.767
Bra038293 Brassica rapa Bra038293 I 0.767
GLYMA19G34220 Glycine max GLYMA19G34220 I 0.767
PGSC0003DMG400015498 Solanum tuberosum PGSC0003DMG400015498 I 0.767
PRUPE_ppa005468mg Prunus persica PRUPE_ppa005468mg I 0.763
PK06347.1 Cannabis sativa PK06347.1 I 0.763
Cucsa.084240 Cucumis sativus Cucsa.084240 I 0.763
Cucsa.306990 Cucumis sativus Cucsa.306990 I 0.763
PRUPE_ppa003849mg Prunus persica PRUPE_ppa003849mg I 0.763
Ca_07799 Cicer arietinum Ca_07799 I 0.763
Cla018101 Citrullus lanatus Cla018101 I 0.763
Cla015029 Citrullus lanatus Cla015029 I 0.763
Pm020252 Prunus mume Pm020252 I 0.763
Pm030100 Prunus mume Pm030100 I 0.763
MDP0000319344 Malus domestica MDP0000319344 I 0.763
gene20264-v1.0-hybrid Fragaria vesca gene20264-v1.0-hybrid I 0.763
Cucsa.181990 Cucumis sativus Cucsa.181990 I 0.762
SapurV1A.2164s0010 Salix purpurea SapurV1A.2164s0010 I 0.762
mgf017113m Mimulus guttatus mgf017113m I 0.762
SapurV1A.1019s0030 Salix purpurea SapurV1A.1019s0030 I 0.762
GLYMA12G29370 Glycine max GLYMA12G29370 I 0.758