CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CAGL0C02519g
(
Candida glabrata
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CAGL0C02519g
T082396_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MIG3
M00023_2.00
Saccharomyces cerevisiae
NNCCCCGCAH
DTGCGGGGNN
PBM
Badis et al.(2008)
MIG3_2054
0.786
0.891
MIG3
M01529_2.00
Saccharomyces cerevisiae
CYCCRBNNN
NNNVYGGRG
PBM
Zhu et al.(2009)
Mig3
0.786
0.891
MIG3
M07453_2.00
Saccharomyces cerevisiae
CCCCRCN
NGYGGGG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0339.1
0.786
0.891
MIG3
M08520_2.00
Saccharomyces cerevisiae
CCCCRCN
NGYGGGG
Misc
DeBoer et al.(2011)
YER028C_501
0.786
0.891
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAG58192
C2H2 ZF
20
42
FRCEICSRGFHRLEHKKRHFRTH
CAG58192
C2H2 ZF
48
72
HKCKFPSCPKSFSRADELKRHSRTH
Links
Other
C2H2 ZF
family TFs
Other
Candida glabrata
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
5988_YER028C
Saccharomyces mikatae
5988_YER028C
I
0.792
SKUD_175702
Saccharomyces kudriavzevii
SKUD_175702
I
0.786
ZYRO0E08426g
Zygosaccharomyces rouxii
ZYRO0E08426g
I
0.786
MIG3
Saccharomyces cerevisiae
YER028C
D
0.786
TBLA_0C04880
Tetrapisispora blattae
TBLA_0C04880
I
0.762
KNAG_0B00590
Kazachstania naganishii
KNAG_0B00590
I
0.757
Scas_Contig712.42
Saccharomyces castellii
Scas_Contig712.42
I
0.756
NCAS_0E00610
Naumovozyma castellii
NCAS_0E00610
I
0.756
KAFR_0I02370
Kazachstania africana
KAFR_0I02370
I
0.756