CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CapteG226252
(
Capitella teleta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CapteG226252
T082749_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Blimp-1
M03692_2.00
Drosophila melanogaster
NNYACTTTCVYYN
NRRBGAAAGTRNN
SELEX
Nitta et al.(2015)
Blimp-1_1
0.756
0.786
Blimp-1
M06141_2.00
Drosophila melanogaster
ACTTTCACTTTY
RAAAGTGAAAGT
B1H
Zhu et al.(2011)
Blimp-1_NAR_FBgn0035625
0.756
0.786
Blimp-1
M06142_2.00
Drosophila melanogaster
RCTTTCMCTTTY
RAAAGKGAAAGY
B1H
Zhu et al.(2011)
Blimp-1_SANGER_5_FBgn0035625
0.756
0.786
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CapteP226252
C2H2 ZF
570
592
YECNICFKNFGQLSNLKVHLRTH
CapteP226252
C2H2 ZF
598
620
FKCTLCSKGFTQLAHLQKHHLVH
CapteP226252
C2H2 ZF
628
648
CSVCGKRFSSTSNLKTHLRLH
CapteP226252
C2H2 ZF
654
676
FQCKLCPARFTQYVHLKLHRRLH
CapteP226252
C2H2 ZF
682
703
YECPKCLRKYISASGLKTHWKS
Links
Other
C2H2 ZF
family TFs
Other
Capitella teleta
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy