CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG04163
(
Caenorhabditis briggsae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CBG04163
T082885_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
C55C2.1_CONSTRUCT
M00649_2.00
PBM CONSTRUCTS
NHYDHHNNN
NNNDDHRDN
PBM
Narasimhan et al.(2015)
pTH10623
0.808
0.926
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG04163
C2H2 ZF
101
123
CQCKVCGKEFSRQWLLQGHLRTH
CBG04163
C2H2 ZF
129
151
FECEICLKRFADKSNLRAHIQTH
CBG04163
C2H2 ZF
157
178
HKCSRCGKNFALKSYLSKHEES
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis briggsae
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy