CBG12674 (Caenorhabditis briggsae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CBG12674 T082921_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
che-1
M00609_2.00
Caenorhabditis elegans
NGAARCCHNN

NNDGGYTTCN
PBM
Narasimhan et al.(2015)
pTH10015
0.825 0.978
che-1
M08451_2.00
Caenorhabditis elegans
SGYTTC

GAARCS
COMPILED
Mathelier et al.(2014)
MA0260.1
0.825 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG12674 C2H2 ZF 175 197
CBG12674 C2H2 ZF 202 224
CBG12674 C2H2 ZF 230 252
CBG12674 C2H2 ZF 258 280

Links

Other C2H2 ZF family TFs
Other Caenorhabditis briggsae TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
che-1 Caenorhabditis elegans WBGene00000483 D 0.825
CBN30944 Caenorhabditis brenneri CBN30944 I 0.825
scaffold142-EXSNAP2012.10 Pristionchus exspectatus scaffold142-EXSNAP2012.10 I 0.758
NECAME_14596 Necator americanus NECAME_14596 I 0.767
NBR_0000131901 Nippostrongylus brasiliensis NBR_0000131901 I 0.767
maker-nMf.1.1.scaf05782-augustus-gene-0.8 Meloidogyne floridensis maker-nMf.1.1.scaf05782-augustus-gene-0.8 I 0.770
HPLM_0001518701 Haemonchus placei HPLM_0001518701 I 0.767
Minc12570 Meloidogyne incognita Minc12570 I 0.770
CRE23561 Caenorhabditis remanei CRE23561 I 0.825
TCNE_0000019201 Toxocara canis TCNE_0000019201 I 0.767