CBG13188 (Caenorhabditis briggsae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CBG13188 T082922_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
tra-1
M10386_2.00 		Caenorhabditis elegans Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
N$TRA1_01 		0.824 0.978
tra-1
M10387_2.00 		Caenorhabditis elegans Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
N$TRA1_02 		0.824 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG13188a C2H2 ZF 220 246
CBG13188a C2H2 ZF 253 276
CBG13188a C2H2 ZF 282 307
CBG13188a C2H2 ZF 313 338
CBG13188b C2H2 ZF 262 288
CBG13188b C2H2 ZF 295 318
CBG13188b C2H2 ZF 324 349
CBG13188b C2H2 ZF 355 380

Links

Other C2H2 ZF family TFs
Other Caenorhabditis briggsae TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
tra-1 Caenorhabditis elegans WBGene00006604 D 0.824
CRE04883 Caenorhabditis remanei CRE04883 I 0.815
CBN25087 Caenorhabditis brenneri CBN25087 I 0.815
CJA00622 Caenorhabditis japonica CJA00622 I 0.812