CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG14844
(
Caenorhabditis briggsae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CBG14844
T082931_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
odd-2
M00618_2.00
Caenorhabditis elegans
NGCTACYGK
MCRGTAGCN
PBM
Narasimhan et al.(2015)
pTH9150
0.820
0.957
Osr2
M00132_2.00
Mus musculus
NGCTWCYGNN
NNCRGWAGCN
PBM
Badis et al.(2009)
Osr2_1727
0.766
0.812
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG14844
C2H2 ZF
124
146
FICSYCQRHFTKSYNLLIHERTH
CBG14844
C2H2 ZF
152
174
YSCDVCGKAFRRQDHLRDHKYIH
CBG14844
C2H2 ZF
180
202
FKCELCGKGFCQSRTLLVHRATH
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis briggsae
TFs
68 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy