CBN03723 (Caenorhabditis brenneri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CBN03723 T082976_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
pag-3
M00619_2.00
Caenorhabditis elegans
NVAATCWSNN

NNSWGATTBN
PBM
Narasimhan et al.(2015)
pTH9969
0.826 0.983
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN03723 C2H2 ZF 125 147
CBN03723 C2H2 ZF 153 175
CBN03723 C2H2 ZF 181 203
CBN03723 C2H2 ZF 209 231
CBN03723 C2H2 ZF 237 260

Links

Other C2H2 ZF family TFs
Other Caenorhabditis brenneri TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANCCAN_06531 Ancylostoma caninum ANCCAN_06531 I 0.790
CBG07657 Caenorhabditis briggsae CBG07657 I 0.824
CRE07651 Caenorhabditis remanei CRE07651 I 0.824
CRE15406 Caenorhabditis remanei CRE15406 I 0.824
OESDEN_04286 Oesophagostomum dentatum OESDEN_04286 I 0.793
pag-3 Caenorhabditis elegans WBGene00003909 D 0.826