CBN05172 (Caenorhabditis brenneri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CBN05172 T082984_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
slr-2
M00634_2.00 		Caenorhabditis elegans
RACTRCAA
TTGYAGTY		 PBM
Narasimhan et al.(2015)
pTH10040 		0.806 0.935
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN05172 C2H2 ZF 48 70
CBN05172 C2H2 ZF 76 99
CBN05172 C2H2 ZF 107 130
CBN05172 C2H2 ZF 137 161

Links

Other C2H2 ZF family TFs
Other Caenorhabditis brenneri TFs

Invalid Input OrderBy

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action