CBN05172 (Caenorhabditis brenneri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CBN05172 T082984_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
slr-2
M00634_2.00
Caenorhabditis elegans
RACTRCAA

TTGYAGTY
PBM
Narasimhan et al.(2015)
pTH10040
0.806 0.935
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN05172 C2H2 ZF 48 70
CBN05172 C2H2 ZF 76 99
CBN05172 C2H2 ZF 107 130
CBN05172 C2H2 ZF 137 161

Links

Other C2H2 ZF family TFs
Other Caenorhabditis brenneri TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BN946_scf184884.g45 Trametes cinnabarina BN946_scf184884.g45 N 0.000
estExt_fgenesh3_kg.C_70272 Heterobasidion annosum estExt_fgenesh3_kg.C_70272 N 0.000
FOMPIDRAFT_1092495 Fomitopsis pinicola FOMPIDRAFT_1092495 N 0.000
HETIRDRAFT_147768 Heterobasidion irregulare HETIRDRAFT_147768 N 0.000
HETIRDRAFT_427159 Heterobasidion irregulare HETIRDRAFT_427159 N 0.000
PAXRUDRAFT_36790 Paxillus rubicundulus PAXRUDRAFT_36790 N 0.000
PHACADRAFT_177314 Phanerochaete carnosa PHACADRAFT_177314 N 0.000