CBN18993 (Caenorhabditis brenneri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CBN18993 T083050_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
blmp-1
M08103_2.00 		Caenorhabditis elegans
YTYTCHYTTTY
RAAARDGARAR		 ChIP-seq
Mathelier et al.(2014)
MA0537.1 		0.827 1.000
blmp-1
M08195_2.00 		Caenorhabditis elegans
VACTTTCDCY
RGHGAAAGTB		 ChIP-seq
Contrino et al.(2012)
Mw137 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN18993 C2H2 ZF 510 532
CBN18993 C2H2 ZF 538 560
CBN18993 C2H2 ZF 566 588
CBN18993 C2H2 ZF 594 616
CBN18993 C2H2 ZF 622 643

Links

Other C2H2 ZF family TFs
Other Caenorhabditis brenneri TFs

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20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action