CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CGGC5_3935
(
Colletotrichum gloeosporioides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CGGC5_3935
T083356_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU00694
M01871_2.00
Neurospora crassa
MGGCCTCC
GGAGGCCK
PBM
Weirauch et al.(2014)
pTH8804
0.771
0.841
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ELA36542
C2H2 ZF
584
606
FMCDECGRFFDQVHKLNHHKRYH
ELA36542
C2H2 ZF
610
635
HECTEPNCGKRFGTKTHLDRHINDKH
ELA36542
C2H2 ZF
641
672
FHCTVSTCPYSKTGGKSFPRKDNWRRHMVNIH
Links
Other
C2H2 ZF
family TFs
Other
Colletotrichum gloeosporioides
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CFIO01_11321
Colletotrichum fioriniae
CFIO01_11321
I
0.801
CSUB01_03365
Colletotrichum sublineola
CSUB01_03365
I
0.801
F503_03587
Ophiostoma piceae uamh
F503_03587
I
0.796
CMQ_8098
Grosmannia clavigera
CMQ_8098
I
0.796
SMAC_01368
Sordaria macrospora
SMAC_01368
I
0.775
estExt_fgenesh1_pg.C_40194
Cryphonectria parasitica
estExt_fgenesh1_pg.C_40194
I
0.773
NCU00694
Neurospora crassa
NCU00694
D
0.771
NEUTE1DRAFT_132720
Neurospora tetrasperma
NEUTE1DRAFT_132720
I
0.771
estExt_Genewise1Plus.C_41610
Neurospora discreta
estExt_Genewise1Plus.C_41610
I
0.771
PODANS_1_18880
Podospora anserina
PODANS_1_18880
I
0.756