CGI_10005451 (Crassostrea gigas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CGI_10005451 T083424_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Kah
M03690_2.00
Drosophila melanogaster
NVCCACCTGTTN

NAACAGGTGGBN
SELEX
Nitta et al.(2015)
CG17181_1
0.773 0.841
Kah
M06137_2.00
Drosophila melanogaster
VCCACCTGT

ACAGGTGGB
B1H
Zhu et al.(2011)
CG17181_SANGER_5_FBgn0035144
0.773 0.841
Kah
M06138_2.00
Drosophila melanogaster
NVCCACCTGYHVVNN

NNBBDRCAGGTGGBN
B1H
Zhu et al.(2011)
CG17181_SOLEXA_5_FBgn0035144
0.773 0.841
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC27677 C2H2 ZF 263 285
EKC27677 C2H2 ZF 295 316
EKC27677 C2H2 ZF 320 342
EKC27677 C2H2 ZF 348 370
EKC27677 C2H2 ZF 376 397

Links

Other C2H2 ZF family TFs
Other Crassostrea gigas TFs

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46 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action