CGI_10016117 (Crassostrea gigas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CGI_10016117 T083522_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
opa
M03668_2.00 		Drosophila melanogaster
BVCCCCCCRYNGHB
VDCNRYGGGGGGBV		 SELEX
Nitta et al.(2015)
opa_1 		0.766 0.902
opa
M05861_2.00 		Drosophila melanogaster
VCCCCCCRYNGNK
MNCNRYGGGGGGB		 SMiLE-seq
Isakova et al.(2017)
Opa 		0.766 0.902
opa
M06468_2.00 		Drosophila melanogaster
GMCCCCCCGCDG
CHGCGGGGGGKC		 B1H
Mathelier et al.(2014)
MA0456.1 		0.766 0.902
opa
M06062_2.00 		Drosophila melanogaster
GMCCCCCCRCDG
CHGYGGGGGGKC		 B1H
Zhu et al.(2011)
opa_NAR_FBgn0003002 		0.766 0.902
opa
M06063_2.00 		Drosophila melanogaster
MKVMMCCCCMCYR
YRGKGGGGKKBMK		 B1H
Zhu et al.(2011)
Opa_SANGER_5_FBgn0003002 		0.766 0.902
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC32446 C2H2 ZF 228 255
EKC32446 C2H2 ZF 261 285
EKC32446 C2H2 ZF 291 315
EKC32446 C2H2 ZF 321 345

Links

Other C2H2 ZF family TFs
Other Crassostrea gigas TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sakowv30026420m.g Saccoglossus kowalevskii Sakowv30026420m.g I 0.792
ZIC1 Monodelphis domestica ENSMODG00000021251 I 0.789
ENSSHAG00000015025 Sarcophilus harrisii ENSSHAG00000015025 I 0.789
csin109208 Clonorchis sinensis csin109208 I 0.788
T265_00048 Opisthorchis viverrini T265_00048 I 0.788
CGI_10016115 Crassostrea gigas CGI_10016115 I 0.781
NEMVEDRAFT_v1g25267 Nematostella vectensis NEMVEDRAFT_v1g25267 I 0.780
ENSONIG00000002719 Oreochromis niloticus ENSONIG00000002719 I 0.780
zic6 Danio rerio ENSDARG00000071496 I 0.780
ENSPFOG00000012980 Poecilia formosa ENSPFOG00000012980 I 0.780
ENSAMXG00000012318 Astyanax mexicanus ENSAMXG00000012318 I 0.780
ENSGMOG00000004419 Gadus morhua ENSGMOG00000004419 I 0.780
Pvit_01334 Pogona vitticeps Pvit_01334 I 0.780
DAPPUDRAFT_290567 Daphnia pulex DAPPUDRAFT_290567 I 0.779
TC010234 Tribolium castaneum TC010234 I 0.778
tetur11g00650 Tetranychus urticae tetur11g00650 I 0.778
nRc.2.0.1.g22468 Romanomermis culicivorax nRc.2.0.1.g22468 I 0.778
KGM_22387 Danaus plexippus KGM_22387 I 0.778
ENSAMXG00000000658 Astyanax mexicanus ENSAMXG00000000658 I 0.777
NV11451 Nasonia vitripennis NV11451 I 0.777
GB54250 Apis mellifera GB54250 I 0.776
AGAP001291 Anopheles gambiae AGAP001291 I 0.775
nLs.2.1.2.g02824 Litomosoides sigmodontis nLs.2.1.2.g02824 I 0.775
ENSCSAVG00000002465 Ciona savignyi ENSCSAVG00000002465 N 0.775
ENSCING00000002517 Ciona intestinalis ENSCING00000002517 N 0.775
ENSCING00000000012 Ciona intestinalis ENSCING00000000012 N 0.775
ENSCING00000000010 Ciona intestinalis ENSCING00000000010 N 0.775
TCLT_0000586501 Thelazia callipaeda TCLT_0000586501 I 0.775
XP_002159358.1 Hydra magnipapillata XP_002159358.1 I 0.775
WBGene00239980 Onchocerca volvulus WBGene00239980 I 0.775
ENSCSAVG00000002459 Ciona savignyi ENSCSAVG00000002459 N 0.775
ENSCING00000021681 Ciona intestinalis ENSCING00000021681 N 0.775
ENSCSAVG00000002454 Ciona savignyi ENSCSAVG00000002454 N 0.775
ENSCSAVG00000002450 Ciona savignyi ENSCSAVG00000002450 N 0.775
ENSCSAVG00000002442 Ciona savignyi ENSCSAVG00000002442 N 0.775
ENSMMUP00000019456 Macaca fascicularis ENSMMUP00000019456 I 0.774
XP_002153782.1 Hydra magnipapillata XP_002153782.1 I 0.774
ZIC5 Ochotona princeps ENSOPRG00000007526 I 0.774
macho1 Ciona intestinalis ENSCING00000007968 I 0.774
ZIC5 Oryctolagus cuniculus ENSOCUG00000026498 I 0.774
ENSCSAVG00000001907 Ciona savignyi ENSCSAVG00000001907 I 0.774
ENSPPYG00000005471 Pongo abelii ENSPPYG00000005471 I 0.774
ZIC5 Sus scrofa ENSSSCG00000009521 I 0.774
ENSDORG00000012706 Dipodomys ordii ENSDORG00000012706 I 0.774
ANCCEY_00370 Ancylostoma ceylanicum ANCCEY_00370 I 0.774
ENSACAG00000003701 Anolis carolinensis ENSACAG00000003701 I 0.773
SMU15031708 Schmidtea mediterranea SMU15031708 I 0.773
Cmyd_10016551 Chelonia mydas Cmyd_10016551 I 0.771
Ogr17257 Ophisaurus gracilis Ogr17257 I 0.771
ENSOANG00000012152 Ornithorhynchus anatinus ENSOANG00000012152 I 0.771
SMU15033928 Schmidtea mediterranea SMU15033928 I 0.770
HelroG77001 Helobdella robusta HelroG77001 N 0.767
MDOA000052 Musca domestica MDOA000052 I 0.766
GI10245 Drosophila mojavensis FBgn0133010 I 0.766
GH23039 Drosophila grimshawi FBgn0130496 I 0.766
GG12590 Drosophila erecta FBgn0104878 I 0.766
GA10924 Drosophila pseudoobscura FBgn0070980 I 0.766
opa Drosophila melanogaster FBgn0003002 D 0.766
GL21621 Drosophila persimilis FBgn0159214 I 0.766
GF18915 Drosophila ananassae FBgn0095929 I 0.766
GJ11051 Drosophila virilis FBgn0198317 I 0.766
GM10780 Drosophila sechellia FBgn0165726 I 0.766
GD19752 Drosophila simulans FBgn0191241 I 0.766
GK13239 Drosophila willistoni FBgn0215248 I 0.766
TMUE_s0101002100 Trichuris muris TMUE_s0101002100 I 0.763
NEMVEDRAFT_v1g121215 Nematostella vectensis NEMVEDRAFT_v1g121215 I 0.762
SVE_0347600 Strongyloides venezuelensis SVE_0347600 I 0.761
SSTP_0000201100 Strongyloides stercoralis SSTP_0000201100 I 0.761
PTRK_0000799900 Parastrongyloides trichosuri PTRK_0000799900 I 0.761
SPAL_0001746600 Strongyloides papillosus SPAL_0001746600 I 0.761
SNAPOd2T00002718001 Oikopleura dioica SNAPOd2T00002718001 I 0.760
CJA16978 Caenorhabditis japonica CJA16978 I 0.757
ENSCING00000022318 Ciona intestinalis ENSCING00000022318 N 0.757
RSKR_0001155900 Rhabditophanes kr3021 RSKR_0001155900 I 0.756