CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CGI_10016801
(
Crassostrea gigas
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CGI_10016801
T083528_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PRDM12
M10213_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM12_01
0.792
0.812
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EKC35319
C2H2 ZF
175
197
LRCVLCRRAFNSRSNLRSHMRIH
EKC35319
C2H2 ZF
203
225
FSCKFCNKCFSQSSTLRNHVRLH
EKC35319
C2H2 ZF
263
287
YKCFVCRCSYSQLAGLRAHQRSARH
Links
Other
C2H2 ZF
family TFs
Other
Crassostrea gigas
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPSIG00000006739
Pelodiscus sinensis
ENSPSIG00000006739
I
0.792
ENSPPYG00000019694
Pongo abelii
ENSPPYG00000019694
I
0.792
PRDM12
Pan troglodytes
ENSPTRG00000021475
I
0.792
PRDM12
Pteropus vampyrus
ENSPVAG00000001511
I
0.792
Prdm12
Rattus norvegicus
ENSRNOG00000009218
I
0.792
ENSPFOG00000019841
Poecilia formosa
ENSPFOG00000019841
I
0.792
ENSPANG00000025967
Papio anubis
ENSPANG00000025967
I
0.792
ENSONIG00000002871
Oreochromis niloticus
ENSONIG00000002871
I
0.792
PRDM12
Ochotona princeps
ENSOPRG00000008680
I
0.792
ENSAMEG00000016234
Ailuropoda melanoleuca
ENSAMEG00000016234
I
0.792
ENSORLG00000017558
Oryzias latipes
ENSORLG00000017558
I
0.792
ENSSHAG00000015972
Sarcophilus harrisii
ENSSHAG00000015972
I
0.792
PRDM12
Sus scrofa
ENSSSCG00000005703
I
0.792
Ogr15453
Ophisaurus gracilis
Ogr15453
I
0.792
Pvit_04639
Pogona vitticeps
Pvit_04639
I
0.792
prdm12
Xenopus tropicalis
XB-GENE-953729
I
0.792
prdm12.L
Xenopus laevis
XB-GENE-953734
I
0.792
Alligator_sinensis_CCG011983.1
Alligator sinensis
Alligator_sinensis_CCG011983.1
I
0.792
ENSXMAG00000005537
Xiphophorus maculatus
ENSXMAG00000005537
I
0.792
ENSSTOG00000005986
Ictidomys tridecemlineatus
ENSSTOG00000005986
I
0.792
ENSTNIG00000005859
Tetraodon nigroviridis
ENSTNIG00000005859
I
0.792
ENSTRUG00000013239
Takifugu rubripes
ENSTRUG00000013239
I
0.792
prdm12b
Takifugu rubripes
ENSTRUG00000018659
I
0.792
PRDM12
Otolemur garnettii
ENSOGAG00000007557
I
0.792
prdm12b
Oryzias latipes
ENSORLG00000007114
I
0.792
prdm12b
Danio rerio
ENSDARG00000007430
I
0.792
PRDM12
Dasypus novemcinctus
ENSDNOG00000042302
I
0.792
PRDM12
Oryctolagus cuniculus
ENSOCUG00000008241
I
0.792
PRDM12
Homo sapiens
ENSG00000130711
D
0.792
ENSCSAG00000014756
Chlorocebus sabaeus
ENSCSAG00000014756
I
0.792
PRDM12
Canis familiaris
ENSCAFG00000023076
I
0.792
ENSAMXG00000007663
Astyanax mexicanus
ENSAMXG00000007663
I
0.792
ENSAMXG00000008540
Astyanax mexicanus
ENSAMXG00000008540
I
0.792
ENSAPLG00000012403
Anas platyrhynchos
ENSAPLG00000012403
I
0.792
PRDM12
Bos taurus
ENSBTAG00000023797
I
0.792
prdm12b
Gasterosteus aculeatus
ENSGACG00000016713
I
0.792
ENSFALG00000001445
Ficedula albicollis
ENSFALG00000001445
I
0.792
PRDM12
Meleagris gallopavo
ENSMGAG00000005438
I
0.792
PRDM12
Microcebus murinus
ENSMICG00000015480
I
0.792
PRDM12
Monodelphis domestica
ENSMODG00000012108
I
0.792
Prdm12
Mus musculus
ENSMUSG00000079466
I
0.792
PRDM12
Gallus gallus
ENSGALG00000003895
I
0.792
ENSOANG00000001043
Ornithorhynchus anatinus
ENSOANG00000001043
I
0.792
ENSLACG00000017560
Latimeria chalumnae
ENSLACG00000017560
I
0.792
ENSGMOG00000011797
Gadus morhua
ENSGMOG00000011797
I
0.792
PRDM12
Loxodonta africana
ENSLAFG00000006979
I
0.792
ENSLOCG00000005429
Lepisosteus oculatus
ENSLOCG00000005429
I
0.792
ENSMEUG00000003828
Macropus eugenii
ENSMEUG00000003828
I
0.792
Sakowv30035316m.g
Saccoglossus kowalevskii
Sakowv30035316m.g
I
0.788
NEMVEDRAFT_v1g119550
Nematostella vectensis
NEMVEDRAFT_v1g119550
I
0.781
Ocbimv22004421m.g
Octopus bimaculoides
Ocbimv22004421m.g
I
0.775
TriadG14897
Trichoplax adhaerens
TriadG14897
I
0.774
LotgiG130157
Lottia gigantea
LotgiG130157
I
0.760
fgenesh2_pg.scaffold_504000008
Branchiostoma floridae
fgenesh2_pg.scaffold_504000008
I
0.760
gw.504.9.1
Branchiostoma floridae
gw.504.9.1
I
0.760