CJA00622 (Caenorhabditis japonica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CJA00622 T083727_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
tra-1
M10386_2.00 		Caenorhabditis elegans Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
N$TRA1_01 		0.809 0.956
tra-1
M10387_2.00 		Caenorhabditis elegans Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
N$TRA1_02 		0.809 0.956
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CJA00622 C2H2 ZF 246 272
CJA00622 C2H2 ZF 279 302
CJA00622 C2H2 ZF 308 333
CJA00622 C2H2 ZF 341 366

Links

Other C2H2 ZF family TFs
Other Caenorhabditis japonica TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBN25087 Caenorhabditis brenneri CBN25087 I 0.824
CBG13188 Caenorhabditis briggsae CBG13188 I 0.812
CRE04883 Caenorhabditis remanei CRE04883 I 0.812
tra-1 Caenorhabditis elegans WBGene00006604 D 0.809