CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CJA04579
(
Caenorhabditis japonica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CJA04579
T083740_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
odd-2
M00618_2.00
Caenorhabditis elegans
NGCTACYGK
MCRGTAGCN
PBM
Narasimhan et al.(2015)
pTH9150
0.823
0.971
Osr2
M00132_2.00
Mus musculus
NGCTWCYGNN
NNCRGWAGCN
PBM
Badis et al.(2009)
Osr2_1727
0.770
0.826
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA04579
C2H2 ZF
125
147
FICKYCERHFTKSYNLLIHERTH
CJA04579
C2H2 ZF
153
175
YSCDVCGKAFRRQDHLRDHKYIH
CJA04579
C2H2 ZF
181
203
FKCEMCGKGFCQSRTLLVHRATH
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis japonica
TFs
69 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy