CRE14657 (Caenorhabditis remanei)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CRE14657 T085019_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
egrh-1
M00622_2.00
Caenorhabditis elegans
CSCCCMCR

YGKGGGSG
PBM
Narasimhan et al.(2015)
pTH9317
0.779 0.912
sr
M06072_2.00
Drosophila melanogaster
HVMCGCCCMCVYMH

DKRBGKGGGCGKBD
B1H
Zhu et al.(2011)
sr_SANGER_5_FBgn0003499
0.774 0.868
sr
M06073_2.00
Drosophila melanogaster
NNMCRCCCMCVHNN

NNDBGKGGGYGKNN
B1H
Zhu et al.(2011)
sr_SOLEXA_5_FBgn0003499
0.774 0.868
EGR2
M00233_2.00
Homo sapiens
HDCCCMCDBN

NVHGKGGGHD
PBM
Barrera et al.(2016)
EGR2_REF
0.759 0.882
Egr2
M00778_2.00
Mus musculus
YRCCCMCGYN

NRCGKGGGYR
PBM
Weirauch et al.(2013)
pTH3091
0.759 0.882
Egr1
M01864_2.00
Mus musculus
CCCMCGYNN

NNRCGKGGG
PBM
Weirauch et al.(2014)
pTH5337
0.759 0.882
Egr1
M00375_2.00
Mus musculus
NCCYMCDNN

NNHGKRGGN
PBM
Berger et al.(2006)
Zif268
0.759 0.882
EGR1
M02883_2.00
Homo sapiens
NMCGCCCMCGCANN

NNTGCGKGGGCGKN
SELEX
Jolma et al.(2013)
EGR1_1
0.759 0.882
EGR1
M02884_2.00
Homo sapiens
HMCGCCCACGCAHW

WDTGCGTGGGCGKD
SELEX
Jolma et al.(2013)
EGR1_2
0.759 0.882
EGR2
M02885_2.00
Homo sapiens
MCGCCCACGCD

HGCGTGGGCGK
SELEX
Jolma et al.(2013)
EGR2_1
0.759 0.882
EGR2
M02886_2.00
Homo sapiens
NNMCGCCCACGCDNN

NNHGCGTGGGCGKNN
SELEX
Jolma et al.(2013)
EGR2_2
0.759 0.882
Egr1
M02932_2.00
Mus musculus
HHMCGCCCMCBCAHHH

DDDTGVGKGGGCGKDD
SELEX
Jolma et al.(2013)
Egr1_1
0.759 0.882
EGR1
M04437_2.00
Homo sapiens
NNCRCCCMCRCNN

NNGYGKGGGYGNN
SELEX
Yin et al.(2017)
EGR1_eDBD_HT-SELEX
0.759 0.882
EGR2
M04439_2.00
Homo sapiens
HMCRCCCACGCNN

NNGCGTGGGYGKD
SELEX
Yin et al.(2017)
EGR2_FL_HT-SELEX
0.759 0.882
Egr1
M05860_2.00
Mus musculus
NNMCRCCCMCGCN

NGCGKGGGYGKNN
SMiLE-seq
Isakova et al.(2017)
EGR1
0.759 0.882
EGR2
M08302_2.00
Homo sapiens
CDCCCMCDC

GHGKGGGHG
ChIP-seq
Schmitges et al.(2016)
P11161_1-3.RCADE
0.759 0.882
EGR1
M07927_2.00
Homo sapiens
NVBNNNNBCCGCCCMCGCNB

VNGCGKGGGCGGVNNNNVBN
ChIP-seq
Gerstein et al.(2012)
GM12878_EGR1_HudsonAlpha
0.759 0.882
EGR1
M07928_2.00
Homo sapiens
BNCCGCCCMCGCNBB

VVNGCGKGGGCGGNV
ChIP-seq
Gerstein et al.(2012)
H1-hESC_EGR1_HudsonAlpha
0.759 0.882
EGR1
M07929_2.00
Homo sapiens
NNNNNNBNNCCRCCCMCGCN

NGCGKGGGYGGNNVNNNNNN
ChIP-seq
Gerstein et al.(2012)
K562_EGR1_HudsonAlpha
0.759 0.882
EGR1
M08882_2.00
Homo sapiens
BHNCCDCCCMCDCHBNB

VNVDGHGKGGGHGGNDV
Misc
Kulakovskiy et al.(2013)
EGR1_HUMAN.H11MO.0.A
0.759 0.882
EGR2
M08884_2.00
Homo sapiens
YYCCDCCCMCDCHYHYHY

RDRDRDGHGKGGGHGGRR
Misc
Kulakovskiy et al.(2013)
EGR2_HUMAN.H11MO.0.A
0.759 0.882
Egr1
M08996_2.00
Mus musculus
YYCCRCCCMCGCNB

VNGCGKGGGYGGRR
Misc
Kulakovskiy et al.(2013)
EGR1_MOUSE.H11MO.0.A
0.759 0.882
Egr2
M08994_2.00
Mus musculus
BHYCCDCCCMCDCN

NGHGKGGGHGGRDV
Misc
Kulakovskiy et al.(2013)
EGR2_MOUSE.H11MO.0.A
0.759 0.882
EGR1
M09506_2.00
Homo sapiens
CRCCCMCRCA

TGYGKGGGYG
Misc
Heinz et al.(2010)
K562-Egr1_GSE32465
0.759 0.882
Egr2
M09515_2.00
Mus musculus
NMCRCCCACDSN

NSHGTGGGYGKN
Misc
Heinz et al.(2010)
Thymocytes-Egr2_GSE34254
0.759 0.882
EGR1
M10188_2.00
Homo sapiens
MCGCCYACGCAW

WTGCGTRGGCGK
Transfac
Matys et al.(2006)
V$EGR1_01
0.759 0.882
EGR1
M10189_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EGR1_02
0.759 0.882
EGR1
M10190_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EGR1_09
0.759 0.882
EGR1
M10191_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EGR1_11
0.759 0.882
EGR1
M10192_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EGR1_12
0.759 0.882
EGR1
M10193_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EGR1_13
0.759 0.882
EGR1
M10194_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EGR1_15
0.759 0.882
EGR1
M10195_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EGR1_Q3
0.759 0.882
EGR1
M10196_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EGR1_Q6
0.759 0.882
EGR2
M10197_2.00
Homo sapiens
MCGCCYACGCAH

DTGCGTRGGCGK
Transfac
Matys et al.(2006)
V$EGR2_01
0.759 0.882
EGR2
M10198_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EGR2_Q4
0.759 0.882
EGR2
M10199_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EGR2_Q6
0.759 0.882
EGR1
M04438_2.00
Homo sapiens
NHCDCCCMCNYNN

NNRNGKGGGHGDN
SELEX
Yin et al.(2017)
EGR1_eDBD_Methyl-HT-SELEX
0.759 0.882
EGR2
M04440_2.00
Homo sapiens
NMCGCCCACRCRN

NYGYGTGGGCGKN
SELEX
Yin et al.(2017)
EGR2_FL_Methyl-HT-SELEX
0.759 0.882
EGR2
M00232_2.00
Homo sapiens
NHMCGCCYNN

NNRGGCGKDN
PBM
Barrera et al.(2016)
EGR2_R409W
0.757 0.868
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE14657 C2H2 ZF 351 375
CRE14657 C2H2 ZF 381 403
CRE14657 C2H2 ZF 409 430

Links

Other C2H2 ZF family TFs
Other Caenorhabditis remanei TFs

Invalid Input OrderBy

233 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action