CRE29848 (Caenorhabditis remanei)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CRE29848 T085086_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
blmp-1
M08103_2.00 		Caenorhabditis elegans
YTYTCHYTTTY
RAAARDGARAR		 ChIP-seq
Mathelier et al.(2014)
MA0537.1 		0.825 0.982
blmp-1
M08195_2.00 		Caenorhabditis elegans
VACTTTCDCY
RGHGAAAGTB		 ChIP-seq
Contrino et al.(2012)
Mw137 		0.825 0.982
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE29848 C2H2 ZF 508 530
CRE29848 C2H2 ZF 536 558
CRE29848 C2H2 ZF 564 586
CRE29848 C2H2 ZF 592 614
CRE29848 C2H2 ZF 620 641

Links

Other C2H2 ZF family TFs
Other Caenorhabditis remanei TFs

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20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action