CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DAPPUDRAFT_129982
(
Daphnia pulex
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
DAPPUDRAFT_129982
T085333_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCRT2
M02925_2.00
Homo sapiens
RHGCAACAGGTGB
VCACCTGTTGCDY
SELEX
Jolma et al.(2013)
SCRT2_1
0.758
0.809
SCRT2
M04643_2.00
Homo sapiens
NGCAACAGGTD
HACCTGTTGCN
SELEX
Yin et al.(2017)
SCRT2_eDBD_HT-SELEX
0.758
0.809
SCRT2
M04644_2.00
Homo sapiens
NGCRACAGGTG
CACCTGTYGCN
SELEX
Yin et al.(2017)
SCRT2_eDBD_Methyl-HT-SELEX
0.758
0.809
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFX69697
C2H2 ZF
47
68
HNDHCGKAYATSSNLSRHKQTH
EFX69697
C2H2 ZF
78
99
PCPTCGKTYVSMPALSMHLLTH
EFX69697
C2H2 ZF
103
125
HVCPVCSKAFSRPWLLQGHMRSH
EFX69697
C2H2 ZF
131
153
YECHLCYKAFADRSNLRAHMQTH
EFX69697
C2H2 ZF
159
180
FRCGQCHKTFALKSYLHKHQET
Links
Other
C2H2 ZF
family TFs
Other
Daphnia pulex
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy