DAPPUDRAFT_129982 (Daphnia pulex)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 DAPPUDRAFT_129982 T085333_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SCRT2
M02925_2.00 		Homo sapiens
RHGCAACAGGTGB
VCACCTGTTGCDY		 SELEX
Jolma et al.(2013)
SCRT2_1 		0.758 0.809
SCRT2
M04643_2.00 		Homo sapiens
NGCAACAGGTD
HACCTGTTGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_HT-SELEX 		0.758 0.809
SCRT2
M04644_2.00 		Homo sapiens
NGCRACAGGTG
CACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_Methyl-HT-SELEX 		0.758 0.809
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFX69697 C2H2 ZF 47 68
EFX69697 C2H2 ZF 78 99
EFX69697 C2H2 ZF 103 125
EFX69697 C2H2 ZF 131 153
EFX69697 C2H2 ZF 159 180

Links

Other C2H2 ZF family TFs
Other Daphnia pulex TFs

Invalid Input OrderBy

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action