DAPPUDRAFT_347540 (Daphnia pulex)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 DAPPUDRAFT_347540 T085418_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
bowl
M03676_2.00
Drosophila melanogaster
GCGTAABACNRGKAGYN

NRCTMCYNGTVTTACGC
SELEX
Nitta et al.(2015)
bowl_1
0.817 0.922
bowl
M03677_2.00
Drosophila melanogaster
NGCTACYGTRTTACGCN

NGCGTAAYACRGTAGCN
SELEX
Nitta et al.(2015)
bowl_2
0.817 0.922
bowl
M06090_2.00
Drosophila melanogaster
RCTWCYGK

MCRGWAGY
B1H
Zhu et al.(2011)
bowl_SANGER_5_FBgn0004893
0.817 0.922
sob
M03674_2.00
Drosophila melanogaster
RCTACYGNRTTACGCV

BGCGTAAYNCRGTAGY
SELEX
Nitta et al.(2015)
sob_1
0.809 0.922
sob
M03675_2.00
Drosophila melanogaster
NGCGTAABNSNRGTAGY

RCTACYNSNVTTACGCN
SELEX
Nitta et al.(2015)
sob_2
0.809 0.922
sob
M06088_2.00
Drosophila melanogaster
GCTWCTGBDNBDV

BHVNHVCAGWAGC
B1H
Zhu et al.(2011)
sob_SANGER_10_FBgn0004892
0.809 0.922
sob
M06089_2.00
Drosophila melanogaster
BDGCTACYGKDBNN

NNVHMCRGTAGCHV
B1H
Zhu et al.(2011)
sob_SOLEXA_5_FBgn0004892
0.809 0.922
OSR2
M04521_2.00
Homo sapiens
NGCTACYGBD

HVCRGTAGCN
SELEX
Yin et al.(2017)
OSR2_eDBD_HT-SELEX
0.789 0.843
OSR2
M08324_2.00
Homo sapiens
NBDGCTNCTGN

NCAGNAGCHVN
ChIP-seq
Schmitges et al.(2016)
Q8N2R0.MEME
0.789 0.843
OSR2
M08908_2.00
Homo sapiens
NBHNYWGCTNCTSHDB

VHDSAGNAGCWRNDVN
Misc
Kulakovskiy et al.(2013)
OSR2_HUMAN.H11MO.0.C
0.789 0.843
OSR2
M04522_2.00
Homo sapiens
NGCTACTGND

HNCAGTAGCN
SELEX
Yin et al.(2017)
OSR2_eDBD_Methyl-HT-SELEX
0.789 0.843
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFX84963 C2H2 ZF 330 352
EFX84963 C2H2 ZF 358 380
EFX84963 C2H2 ZF 386 408
EFX84963 C2H2 ZF 414 436
EFX84963 C2H2 ZF 442 464

Links

Other C2H2 ZF family TFs
Other Daphnia pulex TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
DAPPUDRAFT_238529 Daphnia pulex DAPPUDRAFT_238529 I 0.821
GB49901 Apis mellifera GB49901 I 0.819
ACEP20581 Atta cephalotes ACEP20581 I 0.819
SINV18115 Solenopsis invicta SINV18115 I 0.819
Cflo_02191--XP_393879.3_APIME Camponotus floridanus Cflo_02191--XP_393879.3_APIME I 0.819
GL18676 Drosophila persimilis FBgn0156277 I 0.817
GD23254 Drosophila simulans FBgn0194642 I 0.817
GA10014 Drosophila pseudoobscura FBgn0070073 I 0.817
GF15254 Drosophila ananassae FBgn0092279 I 0.817
GI23940 Drosophila mojavensis FBgn0146665 I 0.817
GG24967 Drosophila erecta FBgn0117096 I 0.817
GJ21213 Drosophila virilis FBgn0208346 I 0.817
GH13710 Drosophila grimshawi FBgn0121186 I 0.817
GE18258 Drosophila yakuba FBgn0235686 I 0.817
LCUP002070 Lucilia cuprina LCUP002070 I 0.817
MDOA005526 Musca domestica MDOA005526 I 0.817
TC005784 Tribolium castaneum TC005784 I 0.817
PHUM445550 Pediculus humanus PHUM445550 I 0.817
bowl Drosophila melanogaster FBgn0004893 D 0.817
L798_02536 Zootermopsis nevadensis L798_02536 I 0.817
GK14650 Drosophila willistoni FBgn0216656 I 0.817
GM18435 Drosophila sechellia FBgn0173342 I 0.817
AAEL008961 Aedes aegypti AAEL008961 I 0.817
ODR2 Anopheles gambiae AGAP008222 I 0.817
ACYPI008391 Acyrthosiphon pisum ACYPI008391 I 0.815
NV12189 Nasonia vitripennis NV12189 I 0.814
GD22744 Drosophila simulans FBgn0194140 I 0.809
GJ17594 Drosophila virilis FBgn0204764 I 0.809
GM18136 Drosophila sechellia FBgn0173043 I 0.809
GH13192 Drosophila grimshawi FBgn0120669 I 0.809
GG24427 Drosophila erecta FBgn0116559 I 0.809
GK15478 Drosophila willistoni FBgn0217483 I 0.809
GI17769 Drosophila mojavensis FBgn0140510 I 0.809
GL19470 Drosophila persimilis FBgn0157069 I 0.809
GA25976 Drosophila pseudoobscura FBgn0247353 I 0.809
NV12185 Nasonia vitripennis NV12185 I 0.809
SINV17987 Solenopsis invicta SINV17987 I 0.809
MCINX006060 Melitaea cinxia MCINX006060 I 0.809
ADAC010373 Anopheles darlingi ADAC010373 I 0.809
GF14663 Drosophila ananassae FBgn0091690 I 0.809
KGM_20290 Danaus plexippus KGM_20290 I 0.809
GE14841 Drosophila yakuba FBgn0232433 I 0.809
GB49914 Apis mellifera GB49914 I 0.809
sob Drosophila melanogaster FBgn0004892 D 0.809
PHUM125070 Pediculus humanus PHUM125070 I 0.808
LCUP002077 Lucilia cuprina LCUP002077 I 0.807
MDOA011451 Musca domestica MDOA011451 I 0.807
ACOM030727 Anopheles coluzzii ACOM030727 I 0.805
AATE001257 Anopheles atroparvus AATE001257 I 0.805
AEPI004813 Anopheles epiroticus AEPI004813 I 0.805
TC005788 Tribolium castaneum TC005788 I 0.805
ODR1 Anopheles gambiae AGAP007973 I 0.805
AFUN006320 Anopheles funestus AFUN006320 I 0.805
AMIN006295 Anopheles minimus AMIN006295 I 0.805
ASTEI01738 Anopheles stephensi ASTEI01738 I 0.805
AFAF004720 Anopheles farauti AFAF004720 I 0.805
AMEM017192 Anopheles merus AMEM017192 I 0.805
AMEC005957 Anopheles melas AMEC005957 I 0.805
YQE_05719 Dendroctonus ponderosae YQE_05719 I 0.805
PHUM125080 Pediculus humanus PHUM125080 I 0.804
ACYPI007518 Acyrthosiphon pisum ACYPI007518 I 0.803
CpipJ_CPIJ010652 Culex pipiens CpipJ_CPIJ010652 I 0.803
AAEL007453 Aedes aegypti AAEL007453 I 0.803
CPIJ010652 Culex quinquefasciatus CPIJ010652 I 0.803
Cflo_02188--XP_001120905.1_APIME Camponotus floridanus Cflo_02188--XP_001120905.1_APIME I 0.801
ACEP20577 Atta cephalotes ACEP20577 I 0.801
ADAC005347 Anopheles darlingi ADAC005347 I 0.797
fgenesh2_pg.scaffold_160000107 Branchiostoma floridae fgenesh2_pg.scaffold_160000107 I 0.796
estExt_fgenesh2_pg.C_1600105 Branchiostoma floridae estExt_fgenesh2_pg.C_1600105 I 0.796
estExt_fgenesh2_pg.C_1600113 Branchiostoma floridae estExt_fgenesh2_pg.C_1600113 I 0.796
fgenesh2_pg.scaffold_160000114 Branchiostoma floridae fgenesh2_pg.scaffold_160000114 I 0.796
L798_02529 Zootermopsis nevadensis L798_02529 I 0.795
ISCW017921 Ixodes scapularis ISCW017921 I 0.793
ISCW005884 Ixodes scapularis ISCW005884 I 0.793
SMAR005255 Strigamia maritima SMAR005255 I 0.793
ENSAMEG00000000519 Ailuropoda melanoleuca ENSAMEG00000000519 I 0.789
XP_002934454 Xenopus tropicalis XP_002934454 I 0.789
OSR2 Pteropus vampyrus ENSPVAG00000004363 I 0.789
OSR2 Gorilla gorilla ENSGGOG00000006716 I 0.789
ENSTSYG00000013426 Tarsius syrichta ENSTSYG00000013426 I 0.789
OSR2 Equus caballus ENSECAG00000017784 I 0.789
OSR2 Homo sapiens ENSG00000164920 D 0.789
OSR2 Erinaceus europaeus ENSEEUG00000008304 I 0.789
Osr2 Dipodomys ordii ENSDORG00000011823 I 0.789
OSR2 Tursiops truncatus ENSTTRG00000007477 I 0.789
osr2 Takifugu rubripes ENSTRUG00000011070 I 0.789
OSR2 Canis familiaris ENSCAFG00000000493 I 0.789
OSR2 Callithrix jacchus ENSCJAG00000015627 I 0.789
ENSSHAG00000007793 Sarcophilus harrisii ENSSHAG00000007793 I 0.789
ENSMMUP00000029201 Macaca fascicularis ENSMMUP00000029201 I 0.789
ENSNLEG00000002725 Nomascus leucogenys ENSNLEG00000002725 I 0.789
ENSGALG00000016016 Gallus gallus ENSGALG00000016016 I 0.789
ENSFALG00000005731 Ficedula albicollis ENSFALG00000005731 I 0.789
ENSOARG00000002902 Ovis aries ENSOARG00000002902 I 0.789
OSR2 Otolemur garnettii ENSOGAG00000007928 I 0.789
OSR2 Ochotona princeps ENSOPRG00000005325 I 0.789
ENSONIG00000006859 Oreochromis niloticus ENSONIG00000006859 I 0.789
OSR2 Macaca mulatta ENSMMUG00000022185 I 0.789
OSR2 Microcebus murinus ENSMICG00000004390 I 0.789
OSR2 Procavia capensis ENSPCAG00000003419 I 0.789
osr2 Oryzias latipes ENSORLG00000002797 I 0.789
ENSPPYG00000018781 Pongo abelii ENSPPYG00000018781 I 0.789
OSR2 Pan troglodytes ENSPTRG00000020463 I 0.789
Sakowv30016612m.g Saccoglossus kowalevskii Sakowv30016612m.g I 0.786
tetur09g03230 Tetranychus urticae tetur09g03230 I 0.784
SPU_024877 Strongylocentrotus purpuratus SPU_024877 I 0.782
SMAR002904 Strigamia maritima SMAR002904 I 0.781
D917_07818 Trichinella nativa D917_07818 I 0.760
D917_03163 Trichinella nativa D917_03163 I 0.760
EFV49300 Trichinella spiralis EFV49300 I 0.760