DAPPUDRAFT_51551 (Daphnia pulex)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 DAPPUDRAFT_51551 T085440_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
KLF2
M04455_2.00
Homo sapiens
NVCCMCRCCCH

DGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF2_eDBD_HT-SELEX
0.804 0.928
KLF2
M10210_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LKLF_Q3
0.804 0.928
KLF2
M10211_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LKLF_Q6
0.804 0.928
KLF2
M04456_2.00
Homo sapiens
NVCCMCRCCCN

NGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF2_eDBD_Methyl-HT-SELEX
0.804 0.928
KLF4
M04463_2.00
Homo sapiens
NVCCACRCCCH

DGGGYGTGGBN
SELEX
Yin et al.(2017)
KLF4_eDBD_HT-SELEX
0.797 0.899
KLF4
M08091_2.00
Homo sapiens
MCACACCCWNN

NNWGGGTGTGK
ChIP-seq
Mathelier et al.(2014)
MA0039.3
0.797 0.899
Klf4
M08021_2.00
Mus musculus
VRCCMCRCCCH

DGGGYGKGGYB
ChIP-seq
Chen et al.(2011)
SRP000217_Klf4
0.797 0.899
KLF4
M08243_2.00
Homo sapiens
RCCMCRCCCH

DGGGYGKGGY
ChIP-seq
Najafabadi et al.(2015b)
KLF14
0.797 0.899
KLF4
M08894_2.00
Homo sapiens
RCCMCRCCCH

DGGGYGKGGY
Misc
Kulakovskiy et al.(2013)
KLF4_HUMAN.H11MO.0.A
0.797 0.899
Klf4
M08964_2.00
Mus musculus
GCCMCRCCCWBYBBN

NVVRVWGGGYGKGGC
Misc
Kulakovskiy et al.(2013)
KLF4_MOUSE.H11MO.0.A
0.797 0.899
KLF4
M10217_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_02
0.797 0.899
KLF4
M10218_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q3_01
0.797 0.899
KLF4
M10219_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q3
0.797 0.899
KLF4
M10220_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q4
0.797 0.899
KLF4
M04464_2.00
Homo sapiens
NVCCMCRCCCN

NGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF4_eDBD_Methyl-HT-SELEX
0.797 0.899
Klf1
M08099_2.00
Mus musculus
NRCCACACCCW

WGGGTGTGGYN
ChIP-seq
Mathelier et al.(2014)
MA0493.1
0.788 0.870
Klf1
M09008_2.00
Mus musculus
MVMNSCCMCRCCCH

DGGGYGKGGSNKBK
Misc
Kulakovskiy et al.(2013)
KLF1_MOUSE.H11MO.0.A
0.788 0.870
Klf1
M09516_2.00
Mus musculus
DRCCACACCCWN

NWGGGTGTGGYH
Misc
Heinz et al.(2010)
Erythrocyte-Klf1_GSE20478
0.788 0.870
KLF1
M00226_2.00
Homo sapiens
CMCGCCCM

KGGGCGKG
PBM
Barrera et al.(2016)
KLF1_REF
0.785 0.870
KLF1
M08293_2.00
Homo sapiens
NVNNNRCCMCRCCCH

DGGGYGKGGYNNNBN
ChIP-seq
Schmitges et al.(2016)
Q13351.MEME
0.785 0.870
KLF1
M08871_2.00
Homo sapiens
SVNDGCCMCRCCCH

DGGGYGKGGCHNBS
Misc
Kulakovskiy et al.(2013)
KLF1_HUMAN.H11MO.0.A
0.785 0.870
KLF1
M10163_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EKLF_Q5_01
0.785 0.870
KLF1
M10164_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EKLF_Q5
0.785 0.870
KLF1
M00224_2.00
Homo sapiens
YMCGCCCH

DGGGCGKR
PBM
Barrera et al.(2016)
KLF1_H299Y
0.785 0.855
KLF5
M04410_2.00
Homo sapiens
NMCACRCCCH

DGGGYGTGKN
SELEX
Yin et al.(2017)
KLF5_eDBD_HT-SELEX
0.781 0.826
KLF5
M08086_2.00
Homo sapiens
BCCMCDCCCH

DGGGHGKGGV
ChIP-seq
Mathelier et al.(2014)
MA0599.1
0.781 0.826
KLF5
M08868_2.00
Homo sapiens
NHVNRCCMCDCCCH

DGGGHGKGGYNBDN
Misc
Kulakovskiy et al.(2013)
KLF5_HUMAN.H11MO.0.A
0.781 0.826
Klf5
M08965_2.00
Mus musculus
KCCMCDCCCHBBBCH

DGVVVDGGGHGKGGM
Misc
Kulakovskiy et al.(2013)
KLF5_MOUSE.H11MO.0.A
0.781 0.826
KLF5
M09502_2.00
Homo sapiens
GCCMCRCCCH

DGGGYGKGGC
Misc
Heinz et al.(2010)
LoVo-KLF5_GSE49402
0.781 0.826
KLF5
M10149_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BTEB2_Q3_01
0.781 0.826
KLF5
M10150_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BTEB2_Q3
0.781 0.826
KLF5
M04411_2.00
Homo sapiens
NMCACRCCYH

DRGGYGTGKN
SELEX
Yin et al.(2017)
KLF5_eDBD_Methyl-HT-SELEX
0.781 0.826
KLF3
M04418_2.00
Homo sapiens
RRCCRCGCCCH

DGGGCGYGGYY
SELEX
Yin et al.(2017)
KLF3_FL_HT-SELEX
0.781 0.797
KLF3
M08876_2.00
Homo sapiens
NSNNVCCMCRCCCHBBBBN

NVVVVDGGGYGKGGBNNSN
Misc
Kulakovskiy et al.(2013)
KLF3_HUMAN.H11MO.0.B
0.781 0.797
Klf3
M08982_2.00
Mus musculus
NSNNVCCMCRCCCHBBBBN

NVVVVDGGGYGKGGBNNSN
Misc
Kulakovskiy et al.(2013)
KLF3_MOUSE.H11MO.0.A
0.781 0.797
KLF3
M10172_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF3_Q3_01
0.781 0.797
KLF3
M10173_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF3_Q3
0.781 0.797
KLF3
M04419_2.00
Homo sapiens
DRCCACGCCCH

DGGGCGTGGYH
SELEX
Yin et al.(2017)
KLF3_FL_Methyl-HT-SELEX_1
0.781 0.797
KLF3
M04420_2.00
Homo sapiens
RRSCGCARCCCN

NGGGYTGCGSYY
SELEX
Yin et al.(2017)
KLF3_FL_Methyl-HT-SELEX_2
0.781 0.797
luna
M03704_2.00
Drosophila melanogaster
RCCACRCCCH

DGGGYGTGGY
SELEX
Nitta et al.(2015)
luna_1
0.772 0.826
luna
M06163_2.00
Drosophila melanogaster
RRMHMCRCCC

GGGYGKDKYY
B1H
Zhu et al.(2011)
luna_SANGER_5_FBgn0040765
0.772 0.826
luna
M06164_2.00
Drosophila melanogaster
DRCCMCGCCCHNNN

NNNDGGGCGKGGYH
B1H
Zhu et al.(2011)
luna_SOLEXA_5_FBgn0040765
0.772 0.826
Klf7
M00134_2.00
Mus musculus
NHHMCRCCCH

DGGGYGKDDN
PBM
Badis et al.(2009)
Klf7_0974
0.768 0.812
KLF7
M08298_2.00
Homo sapiens
VVCHMCGCCCH

DGGGCGKDGBB
ChIP-seq
Schmitges et al.(2016)
O75840.MEME
0.768 0.812
KLF6
M04400_2.00
Homo sapiens
NVMCACRCCCH

DGGGYGTGKBN
SELEX
Yin et al.(2017)
KLF6_eDBD_HT-SELEX
0.768 0.797
KLF6
M08857_2.00
Homo sapiens
BYBYVNBCYMCDCCCYBBN

NVVRGGGHGKRGVNBRVRV
Misc
Kulakovskiy et al.(2013)
KLF6_HUMAN.H11MO.0.A
0.768 0.797
Klf6
M08962_2.00
Mus musculus
BYBYVNBCYMCDCCCYBBN

NVVRGGGHGKRGVNBRVRV
Misc
Kulakovskiy et al.(2013)
KLF6_MOUSE.H11MO.0.B
0.768 0.797
KLF6
M10113_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CPBP_Q6
0.768 0.797
KLF6
M04401_2.00
Homo sapiens
NRCCACGCCCH

DGGGCGTGGYN
SELEX
Yin et al.(2017)
KLF6_eDBD_Methyl-HT-SELEX
0.768 0.797
Klf12
M00787_2.00
Mus musculus
NNHMCRCCCH

DGGGYGKDNN
PBM
Weirauch et al.(2013)
pTH0977
0.758 0.783
Klf12
M02937_2.00
Mus musculus
GRCCACGCCCWHHHN

NDDDWGGGCGTGGYC
SELEX
Jolma et al.(2013)
Klf12_1
0.758 0.783
KLF12
M04430_2.00
Homo sapiens
DRCCACGCCCH

DGGGCGTGGYH
SELEX
Yin et al.(2017)
KLF12_FL_HT-SELEX
0.758 0.783
KLF12
M08299_2.00
Homo sapiens
SBNVGCCMCGCCCHB

VDGGGCGKGGCBNVS
ChIP-seq
Schmitges et al.(2016)
Q9Y4X4.MEME
0.758 0.783
KLF12
M08879_2.00
Homo sapiens
GCCCCGCCCYB

VRGGGCGGGGC
Misc
Kulakovskiy et al.(2013)
KLF12_HUMAN.H11MO.0.C
0.758 0.783
KLF12
M10186_2.00
Homo sapiens
HMYACDG

CHGTRKD
Transfac
Matys et al.(2006)
V$AP2REP_01
0.758 0.783
KLF12
M04431_2.00
Homo sapiens
RGSCGACGCCCN

NGGGCGTCGSCY
SELEX
Yin et al.(2017)
KLF12_FL_Methyl-HT-SELEX_1
0.758 0.783
KLF12
M04432_2.00
Homo sapiens
NRCCACGCCCH

DGGGCGTGGYN
SELEX
Yin et al.(2017)
KLF12_FL_Methyl-HT-SELEX_2
0.758 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFX80125 C2H2 ZF 109 133
EFX80125 C2H2 ZF 139 163
EFX80125 C2H2 ZF 169 191

Links

Other C2H2 ZF family TFs
Other Daphnia pulex TFs

675 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AALB003225 Anopheles albimanus AALB003225 N 0.000
Aan_R003738 Calypte anna Aan_R003738 N 0.000
AARA006109 Anopheles arabiensis AARA006109 N 0.000
AATE009040 Anopheles atroparvus AATE009040 N 0.000
ACEP21606 Atta cephalotes ACEP21606 N 0.000
ACHR007377 Anopheles christyi ACHR007377 N 0.000
ACOM038290 Anopheles coluzzii ACOM038290 N 0.000
ACUA025224 Anopheles culicifacies ACUA025224 N 0.000
ADAC004659 Anopheles darlingi ADAC004659 N 0.000
ADIR009258 Anopheles dirus ADIR009258 N 0.000
AEPI000432 Anopheles epiroticus AEPI000432 N 0.000
AFAF009884 Anopheles farauti AFAF009884 N 0.000
Afo_R005441 Aptenodytes forsteri Afo_R005441 N 0.000
AFUN008496 Anopheles funestus AFUN008496 N 0.000
AGAP004854 Anopheles gambiae AGAP004854 N 0.000
AMAM014474 Anopheles maculatus AMAM014474 N 0.000
AMEC004492 Anopheles melas AMEC004492 N 0.000
AMEM014063 Anopheles merus AMEM014063 N 0.000
AMIN011637 Anopheles minimus AMIN011637 N 0.000
Aqu1.222503 Amphimedon queenslandica Aqu1.222503 N 0.000
AQUA000338 Anopheles quadriannulatus AQUA000338 N 0.000
ASTEI05939 Anopheles stephensi ASTEI05939 N 0.000
BGIBMGA004558 Bombyx mori BGIBMGA004558 N 0.000
Brh_R004837 Buceros rhinoceros Brh_R004837 N 0.000
CapteG147496 Capitella teleta CapteG147496 N 0.000
Cflo_12071--XP_001122635.1_APIME Camponotus floridanus Cflo_12071--XP_001122635.1_APIME N 0.000
CGI_10007771 Crassostrea gigas CGI_10007771 N 0.000
CLEC002198 Cimex lectularius CLEC002198 N 0.000
CLEC007177 Cimex lectularius CLEC007177 N 0.000
Cmyd_10020716 Chelonia mydas Cmyd_10020716 N 0.000
DAPPUDRAFT_301194 Daphnia pulex DAPPUDRAFT_301194 N 0.000
ENSAMEG00000012088 Ailuropoda melanoleuca ENSAMEG00000012088 N 0.000
ENSAMXG00000018648 Astyanax mexicanus ENSAMXG00000018648 N 0.000
ENSAMXG00000024732 Astyanax mexicanus ENSAMXG00000024732 N 0.000
ENSAPLG00000007715 Anas platyrhynchos ENSAPLG00000007715 N 0.000
ENSCSAG00000014155 Chlorocebus sabaeus ENSCSAG00000014155 N 0.000
ENSFALG00000002622 Ficedula albicollis ENSFALG00000002622 N 0.000
ENSGALG00000000427 Gallus gallus ENSGALG00000000427 N 0.000
ENSGMOG00000001476 Gadus morhua ENSGMOG00000001476 N 0.000
ENSGMOG00000019538 Gadus morhua ENSGMOG00000019538 N 0.000
ENSGMOG00000019547 Gadus morhua ENSGMOG00000019547 N 0.000
ENSLACG00000012136 Latimeria chalumnae ENSLACG00000012136 N 0.000
ENSLOCG00000010123 Lepisosteus oculatus ENSLOCG00000010123 N 0.000
ENSMEUG00000014994 Macropus eugenii ENSMEUG00000014994 N 0.000
ENSMLUG00000015035 Myotis lucifugus ENSMLUG00000015035 N 0.000
ENSMLUG00000024285 Myotis lucifugus ENSMLUG00000024285 N 0.000
ENSMPUG00000011183 Mustela putorius furo ENSMPUG00000011183 N 0.000
ENSNLEG00000018101 Nomascus leucogenys ENSNLEG00000018101 N 0.000
ENSOARG00000018421 Ovis aries ENSOARG00000018421 N 0.000
ENSONIG00000016770 Oreochromis niloticus ENSONIG00000016770 N 0.000
ENSONIG00000019223 Oreochromis niloticus ENSONIG00000019223 N 0.000
ENSP00000356233 Macaca fascicularis ENSP00000356233 N 0.000
ENSP00000356233-D1 Bos grunniens ENSP00000356233-D1 N 0.000
ENSPANG00000014633 Papio anubis ENSPANG00000014633 N 0.000
ENSPFOG00000006840 Poecilia formosa ENSPFOG00000006840 N 0.000
ENSPFOG00000015221 Poecilia formosa ENSPFOG00000015221 N 0.000
ENSPMAG00000003030 Petromyzon marinus ENSPMAG00000003030 N 0.000
ENSPPYG00000000346 Pongo abelii ENSPPYG00000000346 N 0.000
ENSPTRG00000021925 Pan troglodytes ENSPTRG00000021925 N 0.000
ENSSHAG00000000588 Sarcophilus harrisii ENSSHAG00000000588 N 0.000
ENSSHAG00000015215 Sarcophilus harrisii ENSSHAG00000015215 N 0.000
ENSSTOG00000000372 Ictidomys tridecemlineatus ENSSTOG00000000372 N 0.000
ENSXMAG00000003378 Xiphophorus maculatus ENSXMAG00000003378 N 0.000
ENSXMAG00000011463 Xiphophorus maculatus ENSXMAG00000011463 N 0.000
GB52426 Apis mellifera GB52426 N 0.000
HMEL015554 Heliconius melpomene HMEL015554 N 0.000
KDM5B Vicugna pacos ENSVPAG00000006056 N 0.000
KDM5B Tursiops truncatus ENSTTRG00000001078 N 0.000
kdm5b Xenopus tropicalis XB-GENE-856240 N 0.000
KDM5B Taeniopygia guttata ENSTGUG00000001257 N 0.000
KDM5B Choloepus hoffmanni ENSCHOG00000012197 N 0.000
KDM5B Tupaia belangeri ENSTBEG00000006521 N 0.000
KDM5B Sus scrofa ENSSSCG00000010928 N 0.000
KDM5B Meleagris gallopavo ENSMGAG00000001393 N 0.000
KDM5B Oryctolagus cuniculus ENSOCUG00000008003 N 0.000
KDM5B Ornithorhynchus anatinus ENSOANG00000002512 N 0.000
KDM5B Echinops telfairi ENSETEG00000018113 N 0.000
Kdm5b Mus musculus ENSMUSG00000042207 N 0.000
KDM5B Monodelphis domestica ENSMODG00000000755 N 0.000
KDM5B Felis catus ENSFCAG00000013102 N 0.000
KDM5B Homo sapiens ENSG00000117139 N 0.000
KDM5B Gorilla gorilla ENSGGOG00000003073 N 0.000
KDM5B Macaca mulatta ENSMMUG00000015233 N 0.000
KDM5B Microcebus murinus ENSMICG00000006046 N 0.000
KDM5B Loxodonta africana ENSLAFG00000005104 N 0.000
KDM5B Equus caballus ENSECAG00000014268 N 0.000
KDM5B Dasypus novemcinctus ENSDNOG00000003205 N 0.000
KDM5B Sorex araneus ENSSARG00000012265 N 0.000
KDM5B Anolis carolinensis ENSACAG00000005107 N 0.000
Kdm5b Rattus norvegicus ENSRNOG00000060544 N 0.000
KDM5B Pteropus vampyrus ENSPVAG00000011030 N 0.000
KDM5B Pan troglodytes ENSPTRG00000001856 N 0.000
KDM5B Bos taurus ENSBTAG00000006175 N 0.000
KDM5B Canis familiaris ENSCAFG00000010452 N 0.000
KDM5B Callithrix jacchus ENSCJAG00000006050 N 0.000
KDM5B Cavia porcellus ENSCPOG00000010644 N 0.000
kdm5ba Tetraodon nigroviridis ENSTNIG00000007074 N 0.000
kdm5ba Oryzias latipes ENSORLG00000014767 N 0.000
kdm5ba Gasterosteus aculeatus ENSGACG00000000508 N 0.000
kdm5ba Takifugu rubripes ENSTRUG00000013308 N 0.000
kdm5ba Danio rerio ENSDARG00000057093 N 0.000
kdm5bb Gasterosteus aculeatus ENSGACG00000011868 N 0.000
kdm5bb Danio rerio ENSDARG00000003098 N 0.000
kdm5bb Oryzias latipes ENSORLG00000014990 N 0.000
KDM5C Sorex araneus ENSSARG00000000542 N 0.000
Kdm5c Rattus norvegicus ENSRNOG00000057706 N 0.000
Kdm5d Mus musculus ENSMUSG00000056673 N 0.000
KGM_20601 Danaus plexippus KGM_20601 N 0.000
LDEC003750 Leptinotarsa decemlineata LDEC003750 N 0.000
LLOJ009523 Lutzomyia longipalpis LLOJ009523 N 0.000
LotgiG205701 Lottia gigantea LotgiG205701 N 0.000
MCINX012993 Melitaea cinxia MCINX012993 N 0.000
Myotis_brandtii_KDM5B_10008160 Myotis brandtii Myotis_brandtii_KDM5B_10008160 N 0.000
Myotis_brandtii_KDM5B_10012819 Myotis brandtii Myotis_brandtii_KDM5B_10012819 N 0.000
NV16665 Nasonia vitripennis NV16665 N 0.000
Ogr08783 Ophisaurus gracilis Ogr08783 N 0.000
RPRC012847 Rhodnius prolixus RPRC012847 N 0.000
Sakowv30029063m.g Saccoglossus kowalevskii Sakowv30029063m.g N 0.000
SMAR004279 Strigamia maritima SMAR004279 N 0.000
Tal_R003404 Tyto alba Tal_R003404 N 0.000
tetur02g05990 Tetranychus urticae tetur02g05990 N 0.000