CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ecym_5424
(
Eremothecium cymbalariae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Ecym_5424
T085668_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AZF1
M00039_2.00
Saccharomyces cerevisiae
YNNHNNNNNN
NNNNNNDNNR
PBM
Badis et al.(2008)
AZF1_2102
0.762
0.826
AZF1
M07469_2.00
Saccharomyces cerevisiae
NTTCTTTTN
NAAAAGAAN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0277.1
0.762
0.826
AZF1
M08542_2.00
Saccharomyces cerevisiae
BTTCTTTTB
VAAAAGAAV
Misc
DeBoer et al.(2011)
YOR113W_499
0.762
0.826
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AET40178
C2H2 ZF
491
513
HECPYCHKCFTQSTHLEVHVRSH
AET40178
C2H2 ZF
519
541
FQCEYCGKRFTQGGNLRTHVRLH
AET40178
C2H2 ZF
547
569
YECDKCGKRFSRKGNLAAHMLTH
AET40178
C2H2 ZF
575
600
FQCKLDDCNKSFTQLGNMKAHQNRFH
Links
Other
C2H2 ZF
family TFs
Other
Eremothecium cymbalariae
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy