CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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EFV52614
(
Trichinella spiralis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
EFV52614
T085718_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Blimp-1
M03692_2.00
Drosophila melanogaster
NNYACTTTCVYYN
NRRBGAAAGTRNN
SELEX
Nitta et al.(2015)
Blimp-1_1
0.772
0.814
Blimp-1
M06141_2.00
Drosophila melanogaster
ACTTTCACTTTY
RAAAGTGAAAGT
B1H
Zhu et al.(2011)
Blimp-1_NAR_FBgn0035625
0.772
0.814
Blimp-1
M06142_2.00
Drosophila melanogaster
RCTTTCMCTTTY
RAAAGKGAAAGY
B1H
Zhu et al.(2011)
Blimp-1_SANGER_5_FBgn0035625
0.772
0.814
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFV52614
C2H2 ZF
514
536
YECDQCSKVFGQLSNLKVHMRTH
EFV52614
C2H2 ZF
542
563
FKCNVCGKEFTQLAHLQKHNLT
EFV52614
C2H2 ZF
592
614
HRCEVCHKRFSSTSNLKTHLRLH
EFV52614
C2H2 ZF
620
642
YACDACPSKFTQFVHLKLHKRLH
EFV52614
C2H2 ZF
648
669
YNCNTCNKKYISPSGLRTHWRT
Links
Other
C2H2 ZF
family TFs
Other
Trichinella spiralis
TFs
73 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy