CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HIC1
(
Anolis carolinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSACAG00000011777
T086066_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hic1
M00141_2.00
Mus musculus
RTGCCMNBN
NVNKGGCAY
PBM
Badis et al.(2009)
Hic1_2816
0.767
0.930
Hic1
M02933_2.00
Mus musculus
RTGCCAVCYBRTGCCAVC
GBTGGCAYVRGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_1
0.767
0.930
Hic1
M02934_2.00
Mus musculus
RTGCCAVCN
NGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_2
0.767
0.930
Hic1
M09003_2.00
Mus musculus
KGGCAMCCH
DGGKTGCCM
Misc
Kulakovskiy et al.(2013)
HIC1_MOUSE.H11MO.0.C
0.767
0.930
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000011510
C2H2 ZF
399
421
YVCIPCGKGFPSSEELNAHVEAH
ENSACAP00000011510
C2H2 ZF
453
475
YRCNSCEKAYKDPATLRQHEKTH
ENSACAP00000011510
C2H2 ZF
481
503
YPCSICGKKFTQRGTMTRHMRSH
ENSACAP00000011510
C2H2 ZF
509
531
FACEACGMRFTRQYRLTEHMRIH
ENSACAP00000011510
C2H2 ZF
537
559
YECRVCGGKFAQQRNLLSHMKMH
Links
Other
C2H2 ZF
family TFs
Other
Anolis carolinensis
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy