CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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ENSAMXG00000001207
(
Astyanax mexicanus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSAMXG00000001207
T087039_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zbtb3
M00152_2.00
Mus musculus
MRCTGSHNN
NNDSCAGYK
PBM
Badis et al.(2009)
Zbtb3_1048
0.777
0.889
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSAMXP00000001230
C2H2 ZF
419
440
TCSTCGKTFSCAYTLRRHAIVH
ENSAMXP00000001230
C2H2 ZF
446
469
YECSYCYRSYTQSGDLYRHIRKAH
Links
Other
C2H2 ZF
family TFs
Other
Astyanax mexicanus
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy