ENSAMXG00000005448 (Astyanax mexicanus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSAMXG00000005448 T087122_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF653
M08248_2.00 		Homo sapiens
NWTTHNYDHCYKCCGACWNHWAWD
HWTWDNWGTCGGMRGDHRNDAAWN		 ChIP-seq
Najafabadi et al.(2015b)
ZNF653 		0.793 0.939
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMXP00000005578 C2H2 ZF 5 30
ENSAMXP00000005578 C2H2 ZF 36 60
ENSAMXP00000005578 C2H2 ZF 66 88
ENSAMXP00000005578 C2H2 ZF 94 116
ENSAMXP00000005578 C2H2 ZF 124 147

Links

Other C2H2 ZF family TFs
Other Astyanax mexicanus TFs

Invalid Input OrderBy

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action