ENSAMXG00000006043 (Astyanax mexicanus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSAMXG00000006043 T087130_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF148
M10238_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CACCCBINDINGFACTOR_Q6 		0.813 0.957
ZNF148
M10239_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZBP89_Q4_01 		0.813 0.957
ZNF148
M10240_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZBP89_Q4 		0.813 0.957
Zfp281
M00139_2.00 		Mus musculus
NHDCCCCCHH
DDGGGGGHDN		 PBM
Badis et al.(2009)
Zfp281_0973 		0.759 0.804
ZNF281
M04509_2.00 		Homo sapiens
SCCCCTCCCCCM
KGGGGGAGGGGS		 SELEX
Yin et al.(2017)
ZNF281_eDBD_HT-SELEX 		0.759 0.804
ZNF281
M08321_2.00 		Homo sapiens
BNCCCCTCCCCC
GGGGGAGGGGNV		 ChIP-seq
Schmitges et al.(2016)
Q9Y2X9_1-4.RCADE 		0.759 0.804
Zfp281
M08025_2.00 		Mus musculus
CCCCWCCCCCMVCHB
VDGBKGGGGGWGGGG		 ChIP-seq
Chen et al.(2011)
GSE11329_zfp281 		0.759 0.804
ZNF281
M08906_2.00 		Homo sapiens
BCCCCTCCCCCHNYN
NRNDGGGGGAGGGGV		 Misc
Kulakovskiy et al.(2013)
ZN281_HUMAN.H11MO.0.A 		0.759 0.804
Zfp281
M08999_2.00 		Mus musculus
CCCCTCCCCCMMCBB
VVGKKGGGGGAGGGG		 Misc
Kulakovskiy et al.(2013)
ZN281_MOUSE.H11MO.0.A 		0.759 0.804
ZNF281
M10237_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZFP281_01 		0.759 0.804
ZNF281
M04510_2.00 		Homo sapiens
RCCCMTCCCCCR
YGGGGGAKGGGY		 SELEX
Yin et al.(2017)
ZNF281_eDBD_Methyl-HT-SELEX 		0.759 0.804
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMXP00000006197 C2H2 ZF 180 202
ENSAMXP00000006197 C2H2 ZF 208 230
ENSAMXP00000006197 C2H2 ZF 236 258
ENSAMXP00000006197 C2H2 ZF 264 287

Links

Other C2H2 ZF family TFs
Other Astyanax mexicanus TFs

Invalid Input OrderBy

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action