CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSAMXG00000014024
(
Astyanax mexicanus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSAMXG00000014024
T087283_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PRDM16
M10223_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_03
0.775
0.921
PRDM16
M10224_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_04
0.775
0.921
PRDM16
M10225_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_05
0.775
0.921
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSAMXP00000014428
C2H2 ZF
81
102
YRCEDCDELFTSKLELRRHQKY
ENSAMXP00000014428
C2H2 ZF
130
152
YECKDCEKIFPSEYSLSQHMVVH
ENSAMXP00000014428
C2H2 ZF
158
180
YKCDQCPKAFNWKSNLIRHQMSH
ENSAMXP00000014428
C2H2 ZF
186
209
FECENCDKVFTDPSNLQRHIRSQH
ENSAMXP00000014428
C2H2 ZF
215
237
HTCPECGKTFATSSGLKQHKHIH
ENSAMXP00000014428
C2H2 ZF
243
265
FMCEVCHKSYTQFSNLCRHKRMH
ENSAMXP00000014428
C2H2 ZF
272
293
IKCKDCGQMFSTTSSLNKHRRF
ENSAMXP00000014428
C2H2 ZF
834
856
YACRYCGKIFPRSANLTRHLRTH
ENSAMXP00000014428
C2H2 ZF
862
885
YRCKYCDRSFSISSNLQRHVRNIH
ENSAMXP00000014428
C2H2 ZF
891
913
FKCHLCNRCFGQQTNLDRHLKKH
Links
Other
C2H2 ZF
family TFs
Other
Astyanax mexicanus
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy