ENSAMXG00000018374 (Astyanax mexicanus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSAMXG00000018374 T087377_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SP2
M04525_2.00
Homo sapiens
NYWAGYCCCGCCCMCYH

DRGKGGGCGGGRCTWRN
SELEX
Yin et al.(2017)
SP2_eDBD_HT-SELEX
0.796 0.913
SP2
M08326_2.00
Homo sapiens
YCCCGCCCM

KGGGCGGGR
ChIP-seq
Schmitges et al.(2016)
Q02086_1-3.RCADE
0.796 0.913
SP2
M08092_2.00
Homo sapiens
BYCCCGCCYCYBNNB

VNNVRGRGGCGGGRV
ChIP-seq
Mathelier et al.(2014)
MA0516.1
0.796 0.913
SP2
M07932_2.00
Homo sapiens
KSCTAGAGMGGCBVB

VBVGCCKCTCTAGSM
ChIP-seq
Gerstein et al.(2012)
K562_SP2_HudsonAlpha
0.796 0.913
SP2
M08911_2.00
Homo sapiens
SBBSNVSBCCCGCCYCYBBBBS

SVVVVRGRGGCGGGVSBNSVVS
Misc
Kulakovskiy et al.(2013)
SP2_HUMAN.H11MO.0.A
0.796 0.913
Sp2
M08970_2.00
Mus musculus
SBBSNVSBCCCGCCYCYBBBBS

SVVVVRGRGGCGGGVSBNSVVS
Misc
Kulakovskiy et al.(2013)
SP2_MOUSE.H11MO.0.B
0.796 0.913
SP2
M10250_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_01
0.796 0.913
SP2
M10251_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_04
0.796 0.913
SP2
M10252_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_06
0.796 0.913
SP2
M10253_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_Q3_01
0.796 0.913
SP2
M10254_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_Q3
0.796 0.913
SP2
M04526_2.00
Homo sapiens
NTWAGYCCCGCCCMCTT

AAGKGGGCGGGRCTWAN
SELEX
Yin et al.(2017)
SP2_eDBD_Methyl-HT-SELEX
0.796 0.913
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMXP00000018923 C2H2 ZF 511 535
ENSAMXP00000018923 C2H2 ZF 541 565
ENSAMXP00000018923 C2H2 ZF 571 593

Links

Other C2H2 ZF family TFs
Other Astyanax mexicanus TFs

Invalid Input OrderBy

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action