CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSAMXG00000019181
(
Astyanax mexicanus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSAMXG00000019181
T087392_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GLIS3
M02880_2.00
Homo sapiens
CTTYGTGGGGGGTM
KACCCCCCACRAAG
SELEX
Jolma et al.(2013)
GLIS3_1
0.771
0.904
GLIS3
M10169_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_01
0.771
0.904
GLIS3
M10170_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6_01
0.771
0.904
GLIS3
M10171_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6
0.771
0.904
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSAMXP00000019755
C2H2 ZF
366
391
HCCRWLDCNATYSHKEELVKHIEKLH
ENSAMXP00000019755
C2H2 ZF
400
427
FTCYWAGCPRRHKPFNARYKLLIHMRVH
ENSAMXP00000019755
C2H2 ZF
434
457
KCTFEGCQKAFSRLENLKIHLRSH
ENSAMXP00000019755
C2H2 ZF
463
487
YTCQHPGCQKAFSNSSDRAKHQRTH
ENSAMXP00000019755
C2H2 ZF
493
517
YACQIQGCLKRYTDPSSLRKHVKSH
Links
Other
C2H2 ZF
family TFs
Other
Astyanax mexicanus
TFs
57 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy