ENSAMXG00000020476 (Astyanax mexicanus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSAMXG00000020476 T087420_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Zfp410
M00140_2.00
Mus musculus
CYATCCCA

TGGGATRG
PBM
Badis et al.(2009)
Zfp410_3034
0.765 0.826
ZNF410
M02882_2.00
Homo sapiens
KVNTATTATGGGATGKN

NMCATCCCATAATANBM
SELEX
Jolma et al.(2013)
ZNF410_1
0.765 0.826
ZNF410
M04435_2.00
Homo sapiens
NTATTATGGGNTRB

VYANCCCATAATAN
SELEX
Yin et al.(2017)
ZNF410_eDBD_HT-SELEX
0.765 0.826
ZNF410
M04436_2.00
Homo sapiens
NTATTATGGGHTRB

VYADCCCATAATAN
SELEX
Yin et al.(2017)
ZNF410_eDBD_Methyl-HT-SELEX
0.765 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMXP00000021087 C2H2 ZF 205 229
ENSAMXP00000021087 C2H2 ZF 235 259
ENSAMXP00000021087 C2H2 ZF 265 289
ENSAMXP00000021087 C2H2 ZF 295 319
ENSAMXP00000021087 C2H2 ZF 325 348

Links

Other C2H2 ZF family TFs
Other Astyanax mexicanus TFs

Invalid Input OrderBy

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action