ENSAMXG00000024869 (Astyanax mexicanus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSAMXG00000024869 T087441_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HIC1
M04568_2.00
Homo sapiens
NRTGCCMMCN

NGKKGGCAYN
SELEX
Yin et al.(2017)
HIC1_eDBD_HT-SELEX
0.822 0.978
HIC1
M08924_2.00
Homo sapiens
KGGCAMCCH

DGGKTGCCM
Misc
Kulakovskiy et al.(2013)
HIC1_HUMAN.H11MO.0.C
0.822 0.978
HIC1
M10265_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIC1_02
0.822 0.978
HIC1
M10266_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIC1_03
0.822 0.978
HIC1
M04569_2.00
Homo sapiens
NRTGCCMMCN

NGKKGGCAYN
SELEX
Yin et al.(2017)
HIC1_eDBD_Methyl-HT-SELEX
0.822 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMXP00000025575 C2H2 ZF 524 546
ENSAMXP00000025575 C2H2 ZF 552 574
ENSAMXP00000025575 C2H2 ZF 580 602
ENSAMXP00000025575 C2H2 ZF 608 630

Links

Other C2H2 ZF family TFs
Other Astyanax mexicanus TFs

Invalid Input OrderBy

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action