ENSAPLG00000003373 (Anas platyrhynchos)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSAPLG00000003373 T087523_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Gfi1b
M08098_2.00
Mus musculus
MAATCWCWGCH

DGCWGWGATTK
ChIP-seq
Mathelier et al.(2014)
MA0483.1
0.812 0.942
Gfi1b
M08977_2.00
Mus musculus
MAAYCACWGH

DCWGWGRTTK
Misc
Kulakovskiy et al.(2013)
GFI1B_MOUSE.H11MO.0.A
0.812 0.942
Gfi1b
M09514_2.00
Mus musculus
MAATCWSWGC

GCWSWGATTK
Misc
Heinz et al.(2010)
HPC7-Gfi1b_GSE22178
0.812 0.942
GFI1B
M00240_2.00
Homo sapiens
NNAAATCWSDN

NHSWGATTTNN
PBM
Barrera et al.(2016)
GFI1B_REF
0.810 0.935
GFI1B
M04523_2.00
Homo sapiens
NMAATCASDGCNNBBCACTNN

NNAGTGVVNNGCHSTGATTKN
SELEX
Yin et al.(2017)
GFI1B_eDBD_HT-SELEX
0.810 0.935
GFI1B
M08909_2.00
Homo sapiens
MAATCWSDGY

RCHSWGATTK
Misc
Kulakovskiy et al.(2013)
GFI1B_HUMAN.H11MO.0.A
0.810 0.935
GFI1B
M10243_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GFI1B_01
0.810 0.935
GFI1B
M10244_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GFI1B_Q6
0.810 0.935
GFI1B
M04524_2.00
Homo sapiens
NMAATCASWGCDNNBCACTHN

NDAGTGVNNHGCWSTGATTKN
SELEX
Yin et al.(2017)
GFI1B_eDBD_Methyl-HT-SELEX
0.810 0.935
GFI1B
M00239_2.00
Homo sapiens
NNAAATCWSDN

NHSWGATTTNN
PBM
Barrera et al.(2016)
GFI1B_A204T
0.800 0.928
sens-2
M06165_2.00
Drosophila melanogaster
RYAAATCWSDGCAYNC

GNRTGCHSWGATTTRY
B1H
Zhu et al.(2011)
sens-2_SANGER_2.5_FBgn0051632
0.787 0.855
GFI1
M00238_2.00
Homo sapiens
NWAWMNNNN

NNNNKWTWN
PBM
Barrera et al.(2016)
GFI1_REF
0.786 0.899
GFI1
M04507_2.00
Homo sapiens
BMAATCACDGCNHBBCACTMN

NKAGTGVVDNGCHGTGATTKV
SELEX
Yin et al.(2017)
GFI1_eDBD_HT-SELEX
0.786 0.899
Gfi1
M02668_2.00
Rattus norvegicus
NMAATCWVHS

SDBWGATTKN
SELEX
Mathelier et al.(2014)
MA0038.1
0.786 0.899
GFI1
M08905_2.00
Homo sapiens
MAATCWSWGY

RCWSWGATTK
Misc
Kulakovskiy et al.(2013)
GFI1_HUMAN.H11MO.0.C
0.786 0.899
Gfi1
M08984_2.00
Mus musculus
MAATCWSWGY

RCWSWGATTK
Misc
Kulakovskiy et al.(2013)
GFI1_MOUSE.H11MO.0.C
0.786 0.899
GFI1
M10235_2.00
Homo sapiens
NNNNNNNRCHSWGATTTDNNBNNN

NNNVNNHAAATCWSDGYNNNNNNN
Transfac
Matys et al.(2006)
V$GFI1_01
0.786 0.899
GFI1
M10236_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GFI1_Q6_01
0.786 0.899
GFI1
M04508_2.00
Homo sapiens
NNAGTGVVNHGCWSTGATTKV

BMAATCASWGCDNBBCACTNN
SELEX
Yin et al.(2017)
GFI1_eDBD_Methyl-HT-SELEX
0.786 0.899
GFI1
M00236_2.00
Homo sapiens
NAATMNNNN

NNNNKATTN
PBM
Barrera et al.(2016)
GFI1_L400F
0.784 0.891
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAPLP00000002863 C2H2 ZF 168 191
ENSAPLP00000002863 C2H2 ZF 197 219
ENSAPLP00000002863 C2H2 ZF 225 247
ENSAPLP00000002863 C2H2 ZF 253 275
ENSAPLP00000002863 C2H2 ZF 281 303
ENSAPLP00000002863 C2H2 ZF 309 332

Links

Other C2H2 ZF family TFs
Other Anas platyrhynchos TFs

137 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MBM_09015 Marssonina brunnea MBM_09015 I 0.000
PITC_068990 Penicillium italicum PITC_068990 I 0.000
PMAA_003200 Talaromyces marneffei PMAA_003200 I 0.000
PMAA_040750 Talaromyces marneffei PMAA_040750 I 0.000
PNEG_02275 Pneumocystis murina PNEG_02275 I 0.000
PODANS_1_20590 Podospora anserina PODANS_1_20590 I 0.000
PTRG_06171 Pyrenophora triticirepentis PTRG_06171 I 0.000
PTT_07342 Pyrenophora teres PTT_07342 I 0.000
PV06_08316 Exophiala oligosperma PV06_08316 I 0.000
PVAR5_3110 Byssochlamys spectabilis PVAR5_3110 I 0.000
S40285_03081 Stachybotrys chlorohalonata S40285_03081 I 0.000
S40288_01674 Stachybotrys chartarum S40288_01674 I 0.000
S40288_01998 Stachybotrys chartarum S40288_01998 I 0.000
SAPIO_CDS2868 Scedosporium apiospermum SAPIO_CDS2868 I 0.000
SBOR_9074 Sclerotinia borealis SBOR_9074 I 0.000
SEPMUDRAFT_153151 Sphaerulina musiva SEPMUDRAFT_153151 I 0.000
SETTUDRAFT_174840 Setosphaeria turcica SETTUDRAFT_174840 I 0.000
SMAC_05404 Sordaria macrospora SMAC_05404 I 0.000
PITC_063570 Penicillium italicum PITC_063570 I 0.000
PFICI_11445 Pestalotiopsis fici PFICI_11445 I 0.000
MBR_05099 Metarhizium brunneum MBR_05099 I 0.000
MBR_08193 Metarhizium brunneum MBR_08193 I 0.000
MCYG_06419 Arthroderma otae MCYG_06419 I 0.000
MGG_02978 Magnaporthe oryzae MGG_02978 I 0.000
MGU_01572 Metarhizium guizhouense MGU_01572 I 0.000
MGYG_06874 Microsporum gypseum MGYG_06874 I 0.000
MYCFIDRAFT_86029 Pseudocercospora fijiensis MYCFIDRAFT_86029 I 0.000
NechaG106035 Fusarium solani NechaG106035 I 0.000
NEMVEDRAFT_v1g97222 Nematostella vectensis NEMVEDRAFT_v1g97222 I 0.000
OCS_00196 Ophiocordyceps sinensis OCS_00196 I 0.000
OCS_05413 Ophiocordyceps sinensis OCS_05413 I 0.000
OCS_06292 Ophiocordyceps sinensis OCS_06292 I 0.000
OIDMADRAFT_143853 Oidiodendron maius OIDMADRAFT_143853 I 0.000
PABG_05778 Paracoccidioides brasiliensis PABG_05778 I 0.000
PCH_Pc22g06930 Penicillium rubens PCH_Pc22g06930 I 0.000
PDE_01613 Penicillium oxalicum PDE_01613 I 0.000
PDE_06698 Penicillium oxalicum PDE_06698 I 0.000
SPBR_08948 Sporothrix brasiliensis SPBR_08948 I 0.000
SPBR_09078 Sporothrix brasiliensis SPBR_09078 I 0.000
YALI0_B02266g Yarrowia lipolytica YALI0_B02266g I 0.000
ZBAI_00389 Zygosaccharomyces bailii ZBAI_00389 I 0.000
ZBAI_05541 Zygosaccharomyces bailii ZBAI_05541 I 0.000
ZYRO0C16214g Zygosaccharomyces rouxii ZYRO0C16214g I 0.000
estExt_fgenesh1_pg.C_10913 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_10913 I 0.000
fgeneshN1_pm.sca_3_chr4_2_0000013 Nectria haematococca fgeneshN1_pm.sca_3_chr4_2_0000013 I 0.000
gw1.41.85.1 Phycomyces blakesleeanus gw1.41.85.1 I 0.000
PredSwiss_CON647.2 Pneumocystis carinii PredSwiss_CON647.2 I 0.000
PredSwiss_EST753.1 Pneumocystis carinii PredSwiss_EST753.1 I 0.000
AB07238.1 Alternaria brassicicola AB07238.1 I 0.000
fgenesh1_pm.00609_#_235 Aspergillus carbonarius fgenesh1_pm.00609_#_235 I 0.000
Pc22g06930 Penicillium chrysogenum Pc22g06930 I 0.000
PMAA_003200 Penicillium marneffei PMAA_003200 I 0.000
PMAA_040750 Penicillium marneffei PMAA_040750 I 0.000
genemark-nMf.1.1.scaf07188-processed-gene-0.1 Meloidogyne floridensis genemark-nMf.1.1.scaf07188-processed-gene-0.1 I 0.000
MhA1_Contig651.frz3.gene5 Meloidogyne hapla MhA1_Contig651.frz3.gene5 I 0.000
SMUV_0000691501 Syphacia muris SMUV_0000691501 I 0.000
X797_008883 Metarhizium robertsii X797_008883 I 0.000
VHEMI07104 Torrubiella hemipterigena VHEMI07104 I 0.000
SS1G_04006 Sclerotinia sclerotiorum SS1G_04006 I 0.000
TEQG_04869 Trichophyton equinum TEQG_04869 I 0.000
TESG_05246 Trichophyton tonsurans TESG_05246 I 0.000
TRIATDRAFT_33998 Trichoderma atroviride TRIATDRAFT_33998 I 0.000
TRIREDRAFT_124341 Trichoderma reesei TRIREDRAFT_124341 I 0.000
TSTA_008530 Talaromyces stipitatus TSTA_008530 I 0.000
TSTA_077960 Talaromyces stipitatus TSTA_077960 I 0.000
U727_00429890111 Penicillium solitum U727_00429890111 I 0.000
U727_00431010161 Penicillium solitum U727_00431010161 I 0.000
UCREL1_7053 Eutypa lata UCREL1_7053 I 0.000
UCRNP2_5172 Neofusicoccum parvum UCRNP2_5172 I 0.000
UV8b_1585 Ustilaginoidea virens UV8b_1585 I 0.000
UV8b_664 Ustilaginoidea virens UV8b_664 I 0.000
V499_06181 Pseudogymnoascus pannorum V499_06181 I 0.000
VDAG_02444 Verticillium dahliae VDAG_02444 I 0.000
VDAG_07007 Verticillium dahliae VDAG_07007 I 0.000
VHEMI05549 Torrubiella hemipterigena VHEMI05549 I 0.000
SMUV_0000981301 Syphacia muris SMUV_0000981301 I 0.000
CIMG_00406 Coccidioides immitis CIMG_00406 I 0.000
CGGC5_2884 Colletotrichum gloeosporioides CGGC5_2884 I 0.000
CGGC5_3189 Colletotrichum gloeosporioides CGGC5_3189 I 0.000
CH063_08155 Colletotrichum higginsianum CH063_08155 I 0.000
CH063_09403 Colletotrichum higginsianum CH063_09403 I 0.000
CHGG_08188 Chaetomium globosum CHGG_08188 I 0.000
CMQ_1586 Grosmannia clavigera CMQ_1586 I 0.000
CMQ_5376 Grosmannia clavigera CMQ_5376 I 0.000
Cob_03892 Colletotrichum orbiculare Cob_03892 I 0.000
COCC4DRAFT_168040 Bipolaris maydis COCC4DRAFT_168040 I 0.000
COCCADRAFT_38231 Bipolaris zeicola COCCADRAFT_38231 I 0.000
COCMIDRAFT_87821 Bipolaris oryzae COCMIDRAFT_87821 I 0.000
COCSADRAFT_171253 Bipolaris sorokiniana COCSADRAFT_171253 I 0.000
COCVIDRAFT_34603 Bipolaris victoriae COCVIDRAFT_34603 I 0.000
CPC735_058040 Coccidioides posadasii CPC735_058040 I 0.000
CPUR_06949 Claviceps purpurea CPUR_06949 I 0.000
CSUB01_02050 Colletotrichum sublineola CSUB01_02050 I 0.000
CFIO01_09392 Colletotrichum fioriniae CFIO01_09392 I 0.000
CCM_04586 Cordyceps militaris CCM_04586 I 0.000
NFIA_105270 Neosartorya fischeri CADNFIAG00010303 I 0.000
MCYG_06419 Microsporum canis MCYG_06419 I 0.000
SNOG_07773 Stagonospora nodorum SNOG_07773 I 0.000
A1O1_07971 Capronia coronata A1O1_07971 I 0.000
A1O5_13042 Cladophialophora psammophila A1O5_13042 I 0.000
AUEXF2481DRAFT_37338 Aureobasidium subglaciale AUEXF2481DRAFT_37338 I 0.000
BAUCODRAFT_67524 Baudoinia compniacensis BAUCODRAFT_67524 I 0.000
BAUCODRAFT_72427 Baudoinia compniacensis BAUCODRAFT_72427 I 0.000
BBA_05443 Beauveria bassiana BBA_05443 I 0.000
Bcin09g02870 Botrytis cinerea Bcin09g02870 I 0.000
BGHDH14_bgh03211 Blumeria graminis BGHDH14_bgh03211 I 0.000
ACLA_049990 Aspergillus clavatus CADACLAG00004890 I 0.000
CADAFLAG00002060 Aspergillus flavus CADAFLAG00002060 I 0.000
AFUA_4G10820 Aspergillus fumigatus CADAFUAG00008327 I 0.000
CADANGAG00004297 Aspergillus niger CADANGAG00004297 I 0.000
ANIA_01962 Aspergillus nidulans CADANIAG00008622 I 0.000
ATEG_03987 Aspergillus terreus CADATEAG00009198 I 0.000
CTHT_0006830 Chaetomium thermophilum CTHT_0006830 I 0.000
MANI_017634 Metarhizium anisopliae MANI_017634 I 0.000
HCBG_05263 Histoplasma capsulatum HCBG_05263 I 0.000
H101_01550 Trichophyton interdigitale H101_01550 I 0.000
H101_00568 Trichophyton interdigitale H101_00568 I 0.000
GMDG_03362 Pseudogymnoascus destructans GMDG_03362 I 0.000
GLRG_08663 Colletotrichum graminicola GLRG_08663 I 0.000
GLRG_04643 Colletotrichum graminicola GLRG_04643 I 0.000
GLOINDRAFT_81724 Rhizophagus irregularis GLOINDRAFT_81724 I 0.000
GLOINDRAFT_60750 Rhizophagus irregularis GLOINDRAFT_60750 I 0.000
HMPREF1624_05084 Sporothrix schenckii HMPREF1624_05084 I 0.000
JAAARDRAFT_113690 Jaapia argillacea JAAARDRAFT_113690 I 0.000
MAM_01740 Metarhizium album MAM_01740 I 0.000
MAJ_11317 Metarhizium majus MAJ_11317 I 0.000
MAJ_07256 Metarhizium majus MAJ_07256 I 0.000
MAC_07229 Metarhizium acridum MAC_07229 I 0.000
MAC_05350 Metarhizium acridum MAC_05350 I 0.000
M438DRAFT_346080 Aureobasidium pullulans M438DRAFT_346080 I 0.000
M437DRAFT_74676 Aureobasidium melanogenum M437DRAFT_74676 I 0.000
LEMA_P042400.1 Leptosphaeria maculans LEMA_P042400.1 I 0.000
GLOINDRAFT_50485 Rhizophagus irregularis GLOINDRAFT_50485 I 0.000
GLOINDRAFT_44046 Rhizophagus irregularis GLOINDRAFT_44046 I 0.000
GGTG_04697 Gaeumannomyces graminis GGTG_04697 I 0.000
DOTSEDRAFT_67720 Dothistroma septosporum DOTSEDRAFT_67720 I 0.000
EPUS_03386 Endocarpon pusillum EPUS_03386 I 0.000
EPUS_08057 Endocarpon pusillum EPUS_08057 I 0.000
EURHEDRAFT_373724 Aspergillus ruber EURHEDRAFT_373724 I 0.000
EURHEDRAFT_401871 Aspergillus ruber EURHEDRAFT_401871 I 0.000
F503_03625 Ophiostoma piceae uamh F503_03625 I 0.000
F503_06490 Ophiostoma piceae uamh F503_06490 I 0.000
FFUJ_05685 Fusarium fujikuroi FFUJ_05685 I 0.000
DOTSEDRAFT_192196 Dothistroma septosporum DOTSEDRAFT_192196 I 0.000
FVEG_04822 Fusarium verticillioides FVEG_04822 I 0.000
FPSE_06551 Fusarium pseudograminearum FPSE_06551 I 0.000
FOXG_07900 Fusarium oxysporum FOXG_07900 I 0.000
FGRRES_08893 Fusarium graminearum FGRRES_08893 I 0.000
FGRRES_05151 Fusarium graminearum FGRRES_05151 I 0.000
FFUJ_13386 Fusarium fujikuroi FFUJ_13386 I 0.000
TRIVIDRAFT_52649 Trichoderma virens TRIVIDRAFT_52649 N 0.000
UCREL1_2891 Eutypa lata UCREL1_2891 N 0.000
CTHT_0001070 Chaetomium thermophilum CTHT_0001070 N 0.000
Cob_13096 Colletotrichum orbiculare Cob_13096 N 0.000