CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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ENSAPLG00000003934
(
Anas platyrhynchos
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSAPLG00000003934
T087530_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PATZ1
M08287_2.00
Homo sapiens
CCCCDCCC
GGGHGGGG
ChIP-seq
Schmitges et al.(2016)
Q9HBE1.MEME
0.825
0.993
PATZ1
M08864_2.00
Homo sapiens
NYBCHNBYBCMKYCYCYBCCMY
RKGGVRGRGRMKGVRVNDGVRN
Misc
Kulakovskiy et al.(2013)
PATZ1_HUMAN.H11MO.0.C
0.825
0.993
PATZ1
M10137_2.00
Homo sapiens
NDDCCCCCCCCSH
DSGGGGGGGGHHN
Transfac
Matys et al.(2006)
V$MAZR_01
0.825
0.993
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSAPLP00000003428
C2H2 ZF
182
204
LPCGLCGKVFTDANRLRQHEAQH
ENSAPLP00000003428
C2H2 ZF
246
267
ACEICGKIFRDVYHLNRHKLSH
ENSAPLP00000003428
C2H2 ZF
273
295
YSCPVCGLRFKRKDRMSYHVRSH
ENSAPLP00000003428
C2H2 ZF
303
326
YICQSCGKGFSRPDHLNGHIKQVH
ENSAPLP00000003428
C2H2 ZF
332
354
HKCQTCNASFATRDRLRSHLACH
ENSAPLP00000003428
C2H2 ZF
386
408
FCTICNRGFSSASYLKVHVKTHH
Links
Other
C2H2 ZF
family TFs
Other
Anas platyrhynchos
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy