ENSAPLG00000008201 (Anas platyrhynchos)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSAPLG00000008201 T087586_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SP3
M02910_2.00
Homo sapiens
VCCMCRCCCMY

RKGGGYGKGGB
SELEX
Jolma et al.(2013)
SP3_1
0.820 0.971
SP3
M04558_2.00
Homo sapiens
NRCCACGCCCMYH

DRKGGGCGTGGYN
SELEX
Yin et al.(2017)
SP3_eDBD_HT-SELEX
0.820 0.971
SP3
M08920_2.00
Homo sapiens
NBBNVSCCCCKCCCMBBBNN

NNVVVKGGGMGGGGSBNVVN
Misc
Kulakovskiy et al.(2013)
SP3_HUMAN.H11MO.0.B
0.820 0.971
SP3
M10263_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP3_Q3_01
0.820 0.971
SP3
M10264_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP3_Q3
0.820 0.971
SP3
M04559_2.00
Homo sapiens
NRCCMCGCCCMCH

DGKGGGCGKGGYN
SELEX
Yin et al.(2017)
SP3_eDBD_Methyl-HT-SELEX
0.820 0.971
Sp3
M08978_2.00
Mus musculus
NBBNVSCCCCKCCCMBBBNN

NNVVVKGGGMGGGGSBNVVN
Misc
Kulakovskiy et al.(2013)
SP3_MOUSE.H11MO.0.B
0.808 0.971
Spps
M06159_2.00
Drosophila melanogaster
KWDRCCMCGCCCMBH

DVKGGGCGKGGYHWM
B1H
Zhu et al.(2011)
CG5669_SANGER_10_FBgn0039169
0.791 0.899
Spps
M06160_2.00
Drosophila melanogaster
BDDGCCMCGCCCMYN

NRKGGGCGKGGCHHV
B1H
Zhu et al.(2011)
CG5669_SOLEXA_5_FBgn0039169
0.791 0.899
SP4
M02879_2.00
Homo sapiens
NWRGCCACGCCCMCHYN

NRDGKGGGCGTGGCYWN
SELEX
Jolma et al.(2013)
SP4_1
0.779 0.928
SP4
M08296_2.00
Homo sapiens
NNVGCYCCKCCYMYH

DRKRGGMGGRGCBNN
ChIP-seq
Schmitges et al.(2016)
Q02446.MEME
0.779 0.928
SP4
M08873_2.00
Homo sapiens
BYHDKCYCCGCCYYYHBSBB

VVSVDRRRGGCGGRGMHDRV
Misc
Kulakovskiy et al.(2013)
SP4_HUMAN.H11MO.0.A
0.779 0.928
SP4
M10165_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP4_Q3
0.779 0.928
SP4
M10166_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP4_Q5
0.779 0.928
Sp5
M09016_2.00
Mus musculus
CYCCKCCYHYHBCYYHBYYYHYHB

VDRDRRRVDRRGVDRDRGGMGGRG
Misc
Kulakovskiy et al.(2013)
SP5_MOUSE.H11MO.0.C
0.779 0.884
SP5
M10319_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP5_Q2
0.779 0.884
SP1
M02921_2.00
Homo sapiens
RCCMCDCCCMH

DKGGGHGKGGY
SELEX
Jolma et al.(2013)
SP1_1
0.778 0.913
SP1
M04605_2.00
Homo sapiens
NWRRCCACGCCCMCH

DGKGGGCGTGGYYWN
SELEX
Yin et al.(2017)
SP1_eDBD_HT-SELEX
0.778 0.913
SP1
M08096_2.00
Homo sapiens
BYCCCKCCCCY

RGGGGMGGGRV
ChIP-seq
Mathelier et al.(2014)
MA0079.3
0.778 0.913
SP1
M08363_2.00
Homo sapiens
CCCHNBCYCCDCCCY

RGGGHGGRGVNDGGG
ChIP-seq
Schmitges et al.(2016)
P08047.MEME
0.778 0.913
SP1
M08938_2.00
Homo sapiens
BCSSSBCCHVGCCCCGCCCCYN

NRGGGGCGGGGCBDGGVSSSGV
Misc
Kulakovskiy et al.(2013)
SP1_HUMAN.H11MO.0.A
0.778 0.913
SP1
M10294_2.00
Homo sapiens
DSCMHGCCYH

DRGGCDKGSH
Transfac
Matys et al.(2006)
V$SP1_01
0.778 0.913
SP1
M10295_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP1_02
0.778 0.913
SP1
M10296_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP1_07
0.778 0.913
SP1
M10297_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP1_08
0.778 0.913
SP1
M10298_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP1_Q2_02
0.778 0.913
SP1
M10299_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP1_Q3
0.778 0.913
SP1
M10300_2.00
Homo sapiens
VVCCCCGCCCMBN

NVKGGGCGGGGBB
Transfac
Matys et al.(2006)
V$SP1_Q6
0.778 0.913
SP1
M04606_2.00
Homo sapiens
NWRGCCMCGCCCMYH

DRKGGGCGKGGCYWN
SELEX
Yin et al.(2017)
SP1_eDBD_Methyl-HT-SELEX
0.778 0.913
Sp1
M00765_2.00
Mus musculus
NMCGCCCMY

RKGGGCGKN
PBM
Weirauch et al.(2013)
pTH0978
0.775 0.899
Sp1
M08963_2.00
Mus musculus
CCCBKCYCCKCCCCCNBCYCSBSC

GSVSGRGVNGGGGGMGGRGMVGGG
Misc
Kulakovskiy et al.(2013)
SP1_MOUSE.H11MO.0.A
0.775 0.899
Sp1
M03682_2.00
Drosophila melanogaster
HNGCCACGCCCARK

MYTGGGCGTGGCND
SELEX
Nitta et al.(2015)
Sp1_1
0.775 0.884
Sp1
M06117_2.00
Drosophila melanogaster
DHYMCGCCCMY

RKGGGCGKRDH
B1H
Zhu et al.(2011)
Sp1_SANGER_5_FBgn0020378
0.775 0.884
Sp1
M06118_2.00
Drosophila melanogaster
NKHHMCGCCCMYNN

NNRKGGGCGKDDMN
B1H
Zhu et al.(2011)
Sp1_SOLEXA_2.5_FBgn0020378
0.775 0.884
Sp4
M01862_2.00
Mus musculus
NMCGCCCMY

RKGGGCGKN
PBM
Weirauch et al.(2014)
pTH4998
0.763 0.913
Sp4
M00133_2.00
Mus musculus
HMCGCCCMYN

NRKGGGCGKD
PBM
Badis et al.(2009)
Sp4_1011
0.763 0.913
Sp4
M05859_2.00
Mus musculus
DGNYMCGCCCHNN

NNDGGGCGKRNCH
SMiLE-seq
Isakova et al.(2017)
SP4
0.763 0.913
Sp4
M08975_2.00
Mus musculus
BYHDKCYCCGCCYYYHBSBB

VVSVDRRRGGCGGRGMHDRV
Misc
Kulakovskiy et al.(2013)
SP4_MOUSE.H11MO.0.B
0.763 0.913
SP9
M04645_2.00
Homo sapiens
VMCMCGCCCMYH

DRKGGGCGKGKB
SELEX
Yin et al.(2017)
SP9_eDBD_HT-SELEX
0.762 0.884
SP9
M04646_2.00
Homo sapiens
RYCACGCCCMYH

DRKGGGCGTGRY
SELEX
Yin et al.(2017)
SP9_eDBD_Methyl-HT-SELEX
0.762 0.884
SP8
M02898_2.00
Homo sapiens
VMCACBCCCMCH

DGKGGGVGTGKB
SELEX
Jolma et al.(2013)
SP8_1
0.762 0.870
SP8
M04517_2.00
Homo sapiens
NMCMCGCCCMYH

DRKGGGCGKGKN
SELEX
Yin et al.(2017)
SP8_eDBD_HT-SELEX
0.762 0.870
SP8
M04518_2.00
Homo sapiens
RHCACGCCCMYH

DRKGGGCGTGDY
SELEX
Yin et al.(2017)
SP8_eDBD_Methyl-HT-SELEX
0.762 0.870
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAPLP00000007853 C2H2 ZF 530 554
ENSAPLP00000007853 C2H2 ZF 560 584
ENSAPLP00000007853 C2H2 ZF 590 612

Links

Other C2H2 ZF family TFs
Other Anas platyrhynchos TFs

530 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 I 0.000
BTMF_0000429201 Brugia timori BTMF_0000429201 I 0.000
ENSCHOG00000000749 Choloepus hoffmanni ENSCHOG00000000749 I 0.000
ENSCSAG00000014350 Chlorocebus sabaeus ENSCSAG00000014350 I 0.000
ENSMEUG00000008000 Macropus eugenii ENSMEUG00000008000 N 0.000
ENSMPUG00000017637 Mustela putorius furo ENSMPUG00000017637 I 0.000
ENSOARG00000005105 Ovis aries ENSOARG00000005105 I 0.000
ENSP00000341243 Macaca fascicularis ENSP00000341243 I 0.000
ENSP00000341243-D1 Bos grunniens ENSP00000341243-D1 I 0.000
ENSPANG00000024780 Papio anubis ENSPANG00000024780 I 0.000
ENSSTOG00000009296 Ictidomys tridecemlineatus ENSSTOG00000009296 I 0.000
GPLIN_001569000 Globodera pallida GPLIN_001569000 I 0.000
Myotis_brandtii_RBPJL_10002478 Myotis brandtii Myotis_brandtii_RBPJL_10002478 I 0.000
RBPJ Homo sapiens ENSG00000168214 D 0.000
RBPJL Pteropus vampyrus ENSPVAG00000008751 I 0.000
RBPJL Pan troglodytes ENSPTRG00000013542 I 0.000
RBPJL Tursiops truncatus ENSTTRG00000013806 I 0.000
RBPJL Otolemur garnettii ENSOGAG00000024900 I 0.000
RBPJL Oryctolagus cuniculus ENSOCUG00000009087 I 0.000
Rbpjl Rattus norvegicus ENSRNOG00000026295 I 0.000
Rbpjl Mus musculus ENSMUSG00000017007 D 0.000
RBPJL Canis familiaris ENSCAFG00000009670 I 0.000
RBPJL Callithrix jacchus ENSCJAG00000017526 I 0.000
RBPJL Cavia porcellus ENSCPOG00000020407 I 0.000
RBPJL Dasypus novemcinctus ENSDNOG00000011919 I 0.000
RBPJL Equus caballus ENSECAG00000013463 I 0.000
RBPJL Erinaceus europaeus ENSEEUG00000013039 I 0.000
RBPJL Echinops telfairi ENSETEG00000005066 I 0.000
RBPJL Homo sapiens ENSG00000124232 I 0.000
RBPJL Loxodonta africana ENSLAFG00000008148 I 0.000
RBPJL Microcebus murinus ENSMICG00000014225 I 0.000
RBPJL Myotis lucifugus ENSMLUG00000005893 I 0.000
RBPJL Macaca mulatta ENSMMUG00000003404 I 0.000
RBPJL Monodelphis domestica ENSMODG00000016187 I 0.000
RBPJL Bos taurus ENSBTAG00000011283 I 0.000