CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSAPLG00000013972
(
Anas platyrhynchos
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSAPLG00000013972
T087642_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GLIS3
M02880_2.00
Homo sapiens
CTTYGTGGGGGGTM
KACCCCCCACRAAG
SELEX
Jolma et al.(2013)
GLIS3_1
0.769
0.930
GLIS3
M10169_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_01
0.769
0.930
GLIS3
M10170_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6_01
0.769
0.930
GLIS3
M10171_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6
0.769
0.930
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSAPLP00000013795
C2H2 ZF
286
311
QVCRWIDCSATYDQQDELVRHIEKTH
ENSAPLP00000013795
C2H2 ZF
320
347
FTCFWAGCVRRYKPFNARYKLLIHMRVH
ENSAPLP00000013795
C2H2 ZF
354
377
KCMFEGCNKAFSRLENLKIHLRSH
ENSAPLP00000013795
C2H2 ZF
383
407
YLCQHPGCQKAFSNSSDRAKHQRTH
ENSAPLP00000013795
C2H2 ZF
413
437
YACQIPGCSKRYTDPSSLRKHVKAH
Links
Other
C2H2 ZF
family TFs
Other
Anas platyrhynchos
TFs
68 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy