ZBTB18 (Bos taurus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSBTAG00000000385 T087692_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZBTB18
M02916_2.00
Homo sapiens
VMACATCTGGAWN

NWTCCAGATGTKB
SELEX
Jolma et al.(2013)
ZNF238_1
0.827 1.000
ZBTB18
M02917_2.00
Homo sapiens
NMACATCTGGMHN

NDKCCAGATGTKN
SELEX
Jolma et al.(2013)
ZNF238_2
0.827 1.000
ZBTB18
M04585_2.00
Homo sapiens
NMACATCTGGMHN

NDKCCAGATGTKN
SELEX
Yin et al.(2017)
ZBTB18_eDBD_HT-SELEX
0.827 1.000
ZBTB18
M08350_2.00
Homo sapiens
MRCAKCTGG

CCAGMTGYK
ChIP-seq
Schmitges et al.(2016)
Q99592_2-4.RCADE
0.827 1.000
ZBTB18
M08257_2.00
Homo sapiens
NMGCAGCTGCKB

VMGCAGCTGCKN
ChIP-seq
Najafabadi et al.(2015b)
ZNF238
0.827 1.000
ZBTB18
M08928_2.00
Homo sapiens
VMRCAKCTGGV

BCCAGMTGYKB
Misc
Kulakovskiy et al.(2013)
ZBT18_HUMAN.H11MO.0.C
0.827 1.000
ZBTB18
M10282_2.00
Homo sapiens
NNMACATCTGGM

KCCAGATGTKNN
Transfac
Matys et al.(2006)
V$RP58_01
0.827 1.000
ZBTB18
M10283_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RP58_Q3
0.827 1.000
ZBTB18
M04586_2.00
Homo sapiens
NMACATCTGBHNN

NNDVCAGATGTKN
SELEX
Yin et al.(2017)
ZBTB18_eDBD_Methyl-HT-SELEX
0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000000497 C2H2 ZF 379 401
ENSBTAP00000000497 C2H2 ZF 420 441
ENSBTAP00000000497 C2H2 ZF 447 469
ENSBTAP00000000497 C2H2 ZF 475 498

Links

Other C2H2 ZF family TFs
Other Bos taurus TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Relb Mus musculus ENSMUSG00000002983 D 0.000
RELB Homo sapiens ENSG00000104856 D 0.000
CLASRP Oryctolagus cuniculus ENSOCUG00000004711 I 0.000
RELB Otolemur garnettii ENSOGAG00000012777 I 0.000
ENSOPRG00000014981 Ochotona princeps ENSOPRG00000014981 I 0.000
ENSPANG00000007219 Papio anubis ENSPANG00000007219 I 0.000
ENSPPYG00000010103 Pongo abelii ENSPPYG00000010103 I 0.000
ENSPSIG00000012895 Pelodiscus sinensis ENSPSIG00000012895 I 0.000
RELB Pan troglodytes ENSPTRG00000011133 I 0.000
RELB Pteropus vampyrus ENSPVAG00000015952 I 0.000
Relb Rattus norvegicus ENSRNOG00000033235 I 0.000
ENSSTOG00000009056 Ictidomys tridecemlineatus ENSSTOG00000009056 I 0.000
RELB Tursiops truncatus ENSTTRG00000015217 I 0.000
Alligator_sinensis_CCG000883.1 Alligator sinensis Alligator_sinensis_CCG000883.1 I 0.000
ENSBTAP00000049624-D1 Bos grunniens ENSBTAP00000049624-D1 I 0.000
ENSP00000221452 Macaca fascicularis ENSP00000221452 I 0.000
Ogr08766 Ophisaurus gracilis Ogr08766 I 0.000
ENSOARG00000009545 Ovis aries ENSOARG00000009545 I 0.000
RELB Anolis carolinensis ENSACAG00000004079 I 0.000
RELB Monodelphis domestica ENSMODG00000020855 I 0.000
ENSAMEG00000012673 Ailuropoda melanoleuca ENSAMEG00000012673 I 0.000
RELB Bos taurus ENSBTAG00000038428 I 0.000
RELB Canis familiaris ENSCAFG00000004597 I 0.000
RELB Callithrix jacchus ENSCJAG00000012991 I 0.000
RELB Cavia porcellus ENSCPOG00000010273 I 0.000
ENSCSAG00000003233 Chlorocebus sabaeus ENSCSAG00000003233 I 0.000
ENSDNOG00000032456 Dasypus novemcinctus ENSDNOG00000032456 I 0.000
Relb Dipodomys ordii ENSDORG00000003448 I 0.000
RELB Equus caballus ENSECAG00000020898 I 0.000
RELB Felis catus ENSFCAG00000025715 I 0.000
RELB Gorilla gorilla ENSGGOG00000003380 I 0.000
RELB Loxodonta africana ENSLAFG00000008071 I 0.000
RELB Microcebus murinus ENSMICG00000006991 I 0.000
RELB Myotis lucifugus ENSMLUG00000006593 I 0.000
RELB Macaca mulatta ENSMMUG00000014153 I 0.000
Pvit_18473 Pogona vitticeps Pvit_18473 I 0.000