CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF398
(
Bos taurus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSBTAG00000020445
T087979_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF398
M07716_2.00
Homo sapiens
CTSYYTCYYTCCCH
DGGGARRGARRSAG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF398.ChIP-seq.ReprocessedData
0.786
0.956
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000027245
C2H2 ZF
343
363
FSCHHCGKSLSQDLLLTHQCG
ENSBTAP00000027245
C2H2 ZF
397
418
TCPHCARTFTHPSRLTYHLRVH
ENSBTAP00000027245
C2H2 ZF
425
447
FPCPDCPKRFADQARLASHRRAH
ENSBTAP00000027245
C2H2 ZF
453
475
FRCAQCGRSFSLKISLLLHQRGH
ENSBTAP00000027245
C2H2 ZF
481
503
FSCPQCGIDFNGHSALIRHQMIH
ENSBTAP00000027245
C2H2 ZF
509
531
YPCTDCSKSFMRKEHLLNHRRLH
ENSBTAP00000027245
C2H2 ZF
537
559
FSCTHCGKSFIRKHHLMKHQRIH
ENSBTAP00000027245
C2H2 ZF
565
588
YPCAQCGRSFRYKQTLKDHLRAGH
Links
Other
C2H2 ZF
family TFs
Other
Bos taurus
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy