CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF558
(
Bos taurus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSBTAG00000030929
T088032_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF558
M07620_2.00
Homo sapiens
HKGRAYHTGTRGRTKBATRYCTTYCAK
MTGRAAGRYATVMAYCYACADRTYCMD
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF558.RCADE.ReprocessedData
0.820
0.951
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000041316
C2H2 ZF
155
176
ECNQCFKVFSTKSNLTQHKRIH
ENSBTAP00000041316
C2H2 ZF
182
204
YDCNQCGKSFSSRSYLTIHKRIH
ENSBTAP00000041316
C2H2 ZF
210
232
YECNDCGKAFNDPSSLRLHVRIH
ENSBTAP00000041316
C2H2 ZF
238
260
YECNQCFHVFRTSCNLKSHKRIH
ENSBTAP00000041316
C2H2 ZF
266
288
HECNQCGKAFSTRSSLTGHNSIH
ENSBTAP00000041316
C2H2 ZF
294
316
YECNDCGKTFRKSSYLTQHMRTH
ENSBTAP00000041316
C2H2 ZF
322
344
YECNQCGKSFSSSFSLTVHKRIH
ENSBTAP00000041316
C2H2 ZF
350
372
YECSNCGKAFNNLSAVKKHVRTH
ENSBTAP00000041316
C2H2 ZF
378
400
YECNHCGKSFTTNSYLSVHKRIH
Links
Other
C2H2 ZF
family TFs
Other
Bos taurus
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy