ZNF550 (Canis familiaris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCAFG00000002421 T088229_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF550
M07772_2.00 		Homo sapiens
TGCCYTAGCMBWSRYTYY
RRARYSWVKGCTARGGCA		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF550.RCADE.OriginalMapping 		0.817 0.967
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000003515 C2H2 ZF 202 224
ENSCAFP00000003515 C2H2 ZF 230 252
ENSCAFP00000003515 C2H2 ZF 258 280
ENSCAFP00000003515 C2H2 ZF 286 308
ENSCAFP00000003515 C2H2 ZF 314 336
ENSCAFP00000003515 C2H2 ZF 342 364
ENSCAFP00000003515 C2H2 ZF 370 392
ENSCAFP00000003515 C2H2 ZF 398 420

Links

Other C2H2 ZF family TFs
Other Canis familiaris TFs

Invalid Input OrderBy

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action