PRDM16 (Canis familiaris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCAFG00000019473 T088448_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM16
M10223_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PRDM16_03 		0.819 0.982
PRDM16
M10224_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PRDM16_04 		0.819 0.982
PRDM16
M10225_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PRDM16_05 		0.819 0.982
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000028796 C2H2 ZF 213 234
ENSCAFP00000028796 C2H2 ZF 265 287
ENSCAFP00000028796 C2H2 ZF 293 315
ENSCAFP00000028796 C2H2 ZF 321 344
ENSCAFP00000028796 C2H2 ZF 350 372
ENSCAFP00000028796 C2H2 ZF 378 400
ENSCAFP00000028796 C2H2 ZF 407 428
ENSCAFP00000028796 C2H2 ZF 934 956
ENSCAFP00000028796 C2H2 ZF 962 985
ENSCAFP00000028796 C2H2 ZF 991 1013
ENSCAFP00000039059 C2H2 ZF 210 231
ENSCAFP00000039059 C2H2 ZF 262 284
ENSCAFP00000039059 C2H2 ZF 290 312
ENSCAFP00000039059 C2H2 ZF 318 341
ENSCAFP00000039059 C2H2 ZF 347 369
ENSCAFP00000039059 C2H2 ZF 375 397
ENSCAFP00000039059 C2H2 ZF 404 425
ENSCAFP00000039059 C2H2 ZF 930 952
ENSCAFP00000039059 C2H2 ZF 958 981
ENSCAFP00000039059 C2H2 ZF 987 1009

Links

Other C2H2 ZF family TFs
Other Canis familiaris TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSP00000417899-D2 Bos grunniens ENSP00000417899-D2 I 0.822
PRDM16 Bos taurus ENSBTAG00000018965 I 0.822
PRDM16 Macaca mulatta ENSMMUG00000009350 I 0.819
ENSPPYG00000001968 Pongo abelii ENSPPYG00000001968 I 0.819
PRDM16 Gorilla gorilla ENSGGOG00000003763 I 0.819
ENSP00000270722 Macaca fascicularis ENSP00000270722 I 0.819
PRDM16 Otolemur garnettii ENSOGAG00000005055 I 0.819
PRDM16 Homo sapiens ENSG00000142611 D 0.819
PRDM16 Equus caballus ENSECAG00000017045 I 0.819
Brh_R007819 Buceros rhinoceros Brh_R007819 I 0.818
Alligator_sinensis_CCG011602.1 Alligator sinensis Alligator_sinensis_CCG011602.1 I 0.818
Afo_R003306 Aptenodytes forsteri Afo_R003306 I 0.818
ENSAPLG00000005898 Anas platyrhynchos ENSAPLG00000005898 I 0.818
PRDM16 Meleagris gallopavo ENSMGAG00000001857 I 0.818
ENSGALG00000001063 Gallus gallus ENSGALG00000001063 I 0.818
Gfo_R009744 Geospiza fortis Gfo_R009744 I 0.818
PRDM16 Loxodonta africana ENSLAFG00000001071 I 0.817
XP_002938538 Xenopus tropicalis XP_002938538 I 0.816
ENSPSIG00000004093 Pelodiscus sinensis ENSPSIG00000004093 I 0.816
PRDM16 Sus scrofa ENSSSCG00000021490 I 0.814
ENSLOCG00000005336 Lepisosteus oculatus ENSLOCG00000005336 I 0.806
ENSFALG00000009580 Ficedula albicollis ENSFALG00000009580 I 0.796
Aan_R005955 Calypte anna Aan_R005955 I 0.796
Ogr15306 Ophisaurus gracilis Ogr15306 I 0.793
PRDM16 Danio rerio ENSDARG00000078324 I 0.775
ENSGMOG00000015664 Gadus morhua ENSGMOG00000015664 I 0.774
ENSAMXG00000014024 Astyanax mexicanus ENSAMXG00000014024 I 0.772
si:ch211-263k4.2 Oryzias latipes ENSORLG00000004492 I 0.769
ENSPFOG00000010341 Poecilia formosa ENSPFOG00000010341 I 0.769
ENSXMAG00000019072 Xiphophorus maculatus ENSXMAG00000019072 I 0.769
si:ch211-263k4.2 Gasterosteus aculeatus ENSGACG00000006600 I 0.769
ENSONIG00000002121 Oreochromis niloticus ENSONIG00000002121 I 0.765