CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRDM16
(
Canis familiaris
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCAFG00000019473
T088448_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PRDM16
M10223_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_03
0.819
0.982
PRDM16
M10224_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_04
0.819
0.982
PRDM16
M10225_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_05
0.819
0.982
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCAFP00000028796
C2H2 ZF
213
234
FRCDACDELFQSKLDLRRHRKY
ENSCAFP00000028796
C2H2 ZF
265
287
HECKDCERMFPNKYSLEQHMVVH
ENSCAFP00000028796
C2H2 ZF
293
315
YKCDQCPKAFNWKSNLIRHQMSH
ENSCAFP00000028796
C2H2 ZF
321
344
FECENCVKVFTDPSNLQRHIRSQH
ENSCAFP00000028796
C2H2 ZF
350
372
HACPDCGKTFATSSGLKQHKHIH
ENSCAFP00000028796
C2H2 ZF
378
400
FICEVCHKSYTQFSNLCRHKRMH
ENSCAFP00000028796
C2H2 ZF
407
428
IKCKDCGQMFSTTSSLNKHRRF
ENSCAFP00000028796
C2H2 ZF
934
956
YTCRYCGKIFPRSANLTRHLRTH
ENSCAFP00000028796
C2H2 ZF
962
985
YRCKYCDRSFSISSNLQRHVRNIH
ENSCAFP00000028796
C2H2 ZF
991
1013
FRCHLCNRCFGQQTNLDRHLKKH
ENSCAFP00000039059
C2H2 ZF
210
231
FRCDACDELFQSKLDLRRHRKY
ENSCAFP00000039059
C2H2 ZF
262
284
HECKDCERMFPNKYSLEQHMVVH
ENSCAFP00000039059
C2H2 ZF
290
312
YKCDQCPKAFNWKSNLIRHQMSH
ENSCAFP00000039059
C2H2 ZF
318
341
FECENCVKVFTDPSNLQRHIRSQH
ENSCAFP00000039059
C2H2 ZF
347
369
HACPDCGKTFATSSGLKQHKHIH
ENSCAFP00000039059
C2H2 ZF
375
397
FICEVCHKSYTQFSNLCRHKRMH
ENSCAFP00000039059
C2H2 ZF
404
425
IKCKDCGQMFSTTSSLNKHRRF
ENSCAFP00000039059
C2H2 ZF
930
952
YTCRYCGKIFPRSANLTRHLRTH
ENSCAFP00000039059
C2H2 ZF
958
981
YRCKYCDRSFSISSNLQRHVRNIH
ENSCAFP00000039059
C2H2 ZF
987
1009
FRCHLCNRCFGQQTNLDRHLKKH
Links
Other
C2H2 ZF
family TFs
Other
Canis familiaris
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy