CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF354B
(
Canis familiaris
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCAFG00000029114
T088517_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF354B
M07653_2.00
Homo sapiens
RDWTAKYYCMTT
AAKGRRMTAWHY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354B.RCADE.ReprocessedData
0.820
0.977
ZNF354A
M08331_2.00
Homo sapiens
RTTTARDCCATTTAY
RTAAATGGHYTAAAY
ChIP-seq
Schmitges et al.(2016)
O60765_5-9.RCADE
0.773
0.926
ZNF354A
M07622_2.00
Homo sapiens
RTTTARHCCATTTAC
GTAAATGGDYTAAAY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354A.RCADE.OriginalMapping
0.773
0.926
ZNF354A
M08914_2.00
Homo sapiens
DTTYHDNYCHTTTMYWTTTADTGW
WCAHTAAAWRKAAADGRNHDRAAH
Misc
Kulakovskiy et al.(2013)
Z354A_HUMAN.H11MO.0.C
0.773
0.926
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCAFP00000040401
C2H2 ZF
290
312
YKCNICEKAFIHNSSLRKHQKNH
ENSCAFP00000040401
C2H2 ZF
318
340
FKCRECLKAFSQSSALIQHQRTH
ENSCAFP00000040401
C2H2 ZF
346
368
YICKECGKAFSHSASLCKHLRTH
ENSCAFP00000040401
C2H2 ZF
374
396
YRCKECGKSFSRRSGLFIHQKIH
ENSCAFP00000040401
C2H2 ZF
428
450
YLCNECGNTFKSSSSLRYHQRIH
ENSCAFP00000040401
C2H2 ZF
456
478
FKCSECGRAFSQSASLIQHERIH
ENSCAFP00000040401
C2H2 ZF
484
506
YRCNECGKGFTSISRLNRHRIIH
ENSCAFP00000040401
C2H2 ZF
512
534
YNCNECGKALSSHSTLIIHERIH
ENSCAFP00000040401
C2H2 ZF
540
562
CKCKVCGKAFRQSSALIQHQRMH
ENSCAFP00000040401
C2H2 ZF
568
590
YKCNECGKTFRCNSSLSNHQRIH
ENSCAFP00000040401
C2H2 ZF
596
618
YRCLECGISFGQSAALIQHQRIH
ENSCAFP00000040401
C2H2 ZF
624
646
FECHTCGKTFRQSSSLIAHQRIH
ENSCAFP00000040401
C2H2 ZF
652
674
YECNACGKLFSQRSSLTNHYKIH
ENSCAFP00000040638
C2H2 ZF
215
237
YKCNICEKAFIHNSSLRKHQKNH
ENSCAFP00000040638
C2H2 ZF
243
265
FKCRECLKAFSQSSALIQHQRTH
ENSCAFP00000040638
C2H2 ZF
271
293
YICKECGKAFSHSASLCKHLRTH
ENSCAFP00000040638
C2H2 ZF
299
321
YRCKECGKSFSRRSGLFIHQKIH
Links
Other
C2H2 ZF
family TFs
Other
Canis familiaris
TFs
56 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy