ZNF454 (Canis familiaris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCAFG00000031168 T088620_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF454
M04571_2.00
Homo sapiens
WRGCGCCWGGCGCYW

WRGCGCCWGGCGCYW
SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_1
0.825 0.982
ZNF454
M04572_2.00
Homo sapiens
TRGCGCCGGCGCYN

NRGCGCCGGCGCYA
SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_2
0.825 0.982
ZNF454
M08346_2.00
Homo sapiens
KVVRNCHNYMRGGGCCNDGDGCCWTTB

VAAWGGCHCHNGGCCCYKRNDGNYBBM
ChIP-seq
Schmitges et al.(2016)
Q8N9F8_4-12.RCADE
0.825 0.982
ZNF454
M08256_2.00
Homo sapiens
GWGCYTT

AARGCWC
ChIP-seq
Najafabadi et al.(2015b)
ZNF454
0.825 0.982
ZNF454
M07651_2.00
Homo sapiens
CRKVVRHCCVYCRGGVCCBVGAGCCNKYB

VRMNGGCTCBVGGBCCYGRBRGDYBBMYG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF454.MEME.OriginalMapping
0.825 0.982
ZNF454
M04573_2.00
Homo sapiens
WRGCGCCWGGCGCYW

WRGCGCCWGGCGCYW
SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_1
0.825 0.982
ZNF454
M04574_2.00
Homo sapiens
TRGCGCCGGCGCYN

NRGCGCCGGCGCYA
SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_2
0.825 0.982
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000036135 C2H2 ZF 164 186
ENSCAFP00000036135 C2H2 ZF 203 225
ENSCAFP00000036135 C2H2 ZF 231 253
ENSCAFP00000036135 C2H2 ZF 259 281
ENSCAFP00000036135 C2H2 ZF 287 309
ENSCAFP00000036135 C2H2 ZF 315 337
ENSCAFP00000036135 C2H2 ZF 343 365
ENSCAFP00000036135 C2H2 ZF 371 393
ENSCAFP00000036135 C2H2 ZF 399 421
ENSCAFP00000036135 C2H2 ZF 427 449
ENSCAFP00000036135 C2H2 ZF 455 477
ENSCAFP00000036135 C2H2 ZF 483 505

Links

Other C2H2 ZF family TFs
Other Canis familiaris TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
evm.TU.supercontig_139.30 Carica papaya evm.TU.supercontig_139.30 N 0.000
Gorai.011G047900 Gossypium raimondii Gorai.011G047900 N 0.000
MDP0000233286 Malus domestica MDP0000233286 N 0.000
POPTR_0011s02560 Populus trichocarpa POPTR_0011s02560 N 0.000
Pm010460 Prunus mume Pm010460 N 0.000
PRUPE_ppa008991mg Prunus persica PRUPE_ppa008991mg N 0.000
29599.m000171 Ricinus communis 29599.m000171 N 0.000
SapurV1A.0242s0210 Salix purpurea SapurV1A.0242s0210 N 0.000
TCM_029419 Theobroma cacao TCM_029419 N 0.000
VIT_10s0003g04040 Vitis vinifera VIT_10s0003g04040 N 0.000