ZSCAN16 (Canis familiaris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCAFG00000032617 T088698_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZSCAN16
M02924_2.00
Homo sapiens
MRTGTTAACAGAACACCY

RGGTGTTCTGTTAACAYK
SELEX
Jolma et al.(2013)
ZNF435_1
0.807 0.957
ZSCAN16
M04623_2.00
Homo sapiens
HGAGGCTCTGTTAACAHTB

VADTGTTAACAGAGCCTCD
SELEX
Yin et al.(2017)
ZSCAN16_eDBD_HT-SELEX
0.807 0.957
ZSCAN16
M04625_2.00
Homo sapiens
NGAGGCTCTGTTAACANYN

NRNTGTTAACAGAGCCTCN
SELEX
Yin et al.(2017)
ZSCAN16_FL_HT-SELEX
0.807 0.957
ZSCAN16
M08377_2.00
Homo sapiens
RTRTRTRTATRTRTRTRTATATRT

AYATATAYAYAYAYATAYAYAYAY
ChIP-seq
Schmitges et al.(2016)
Q9H4T2.MEME
0.807 0.957
ZSCAN16
M04624_2.00
Homo sapiens
HGAGGCTCTGTTAACAHTB

VADTGTTAACAGAGCCTCD
SELEX
Yin et al.(2017)
ZSCAN16_eDBD_Methyl-HT-SELEX
0.807 0.957
ZSCAN16
M04626_2.00
Homo sapiens
NGAGGCTCTGTTAACAHTN

NADTGTTAACAGAGCCTCN
SELEX
Yin et al.(2017)
ZSCAN16_FL_Methyl-HT-SELEX
0.807 0.957
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000036130 C2H2 ZF 236 258
ENSCAFP00000036130 C2H2 ZF 264 286
ENSCAFP00000036130 C2H2 ZF 292 314
ENSCAFP00000036130 C2H2 ZF 320 342

Links

Other C2H2 ZF family TFs
Other Canis familiaris TFs

Invalid Input OrderBy

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action