ZNF454 (Choloepus hoffmanni)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCHOG00000002770 T088770_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF454
M04571_2.00
Homo sapiens
WRGCGCCWGGCGCYW

WRGCGCCWGGCGCYW
SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_1
0.820 0.982
ZNF454
M04572_2.00
Homo sapiens
TRGCGCCGGCGCYN

NRGCGCCGGCGCYA
SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_2
0.820 0.982
ZNF454
M08346_2.00
Homo sapiens
KVVRNCHNYMRGGGCCNDGDGCCWTTB

VAAWGGCHCHNGGCCCYKRNDGNYBBM
ChIP-seq
Schmitges et al.(2016)
Q8N9F8_4-12.RCADE
0.820 0.982
ZNF454
M08256_2.00
Homo sapiens
GWGCYTT

AARGCWC
ChIP-seq
Najafabadi et al.(2015b)
ZNF454
0.820 0.982
ZNF454
M07651_2.00
Homo sapiens
CRKVVRHCCVYCRGGVCCBVGAGCCNKYB

VRMNGGCTCBVGGBCCYGRBRGDYBBMYG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF454.MEME.OriginalMapping
0.820 0.982
ZNF454
M04573_2.00
Homo sapiens
WRGCGCCWGGCGCYW

WRGCGCCWGGCGCYW
SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_1
0.820 0.982
ZNF454
M04574_2.00
Homo sapiens
TRGCGCCGGCGCYN

NRGCGCCGGCGCYA
SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_2
0.820 0.982
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCHOP00000002452 C2H2 ZF 182 204
ENSCHOP00000002452 C2H2 ZF 221 243
ENSCHOP00000002452 C2H2 ZF 249 271
ENSCHOP00000002452 C2H2 ZF 277 299
ENSCHOP00000002452 C2H2 ZF 305 327
ENSCHOP00000002452 C2H2 ZF 333 355
ENSCHOP00000002452 C2H2 ZF 361 383
ENSCHOP00000002452 C2H2 ZF 389 411
ENSCHOP00000002452 C2H2 ZF 417 439
ENSCHOP00000002452 C2H2 ZF 445 467
ENSCHOP00000002452 C2H2 ZF 473 495
ENSCHOP00000002452 C2H2 ZF 501 523

Links

Other C2H2 ZF family TFs
Other Choloepus hoffmanni TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACLA_065740 Aspergillus clavatus CADACLAG00006139 N 0.000
CADANGAG00009534 Aspergillus niger CADANGAG00009534 N 0.000
ATEG_01811 Aspergillus terreus CADATEAG00003139 N 0.000
NFIA_114540 Neosartorya fischeri CADNFIAG00010526 N 0.000
EURHEDRAFT_456915 Aspergillus ruber EURHEDRAFT_456915 N 0.000
PV05_04333 Exophiala xenobiotica PV05_04333 N 0.000
PV06_01296 Exophiala oligosperma PV06_01296 N 0.000
fgenesh1_pg.00868_#_68 Aspergillus carbonarius fgenesh1_pg.00868_#_68 N 0.000