ZNF454 (Choloepus hoffmanni)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCHOG00000002770 T088770_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF454
M04571_2.00
Homo sapiens
WRGCGCCWGGCGCYW

WRGCGCCWGGCGCYW
SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_1
0.820 0.982
ZNF454
M04572_2.00
Homo sapiens
TRGCGCCGGCGCYN

NRGCGCCGGCGCYA
SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_2
0.820 0.982
ZNF454
M08346_2.00
Homo sapiens
KVVRNCHNYMRGGGCCNDGDGCCWTTB

VAAWGGCHCHNGGCCCYKRNDGNYBBM
ChIP-seq
Schmitges et al.(2016)
Q8N9F8_4-12.RCADE
0.820 0.982
ZNF454
M08256_2.00
Homo sapiens
GWGCYTT

AARGCWC
ChIP-seq
Najafabadi et al.(2015b)
ZNF454
0.820 0.982
ZNF454
M07651_2.00
Homo sapiens
CRKVVRHCCVYCRGGVCCBVGAGCCNKYB

VRMNGGCTCBVGGBCCYGRBRGDYBBMYG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF454.MEME.OriginalMapping
0.820 0.982
ZNF454
M04573_2.00
Homo sapiens
WRGCGCCWGGCGCYW

WRGCGCCWGGCGCYW
SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_1
0.820 0.982
ZNF454
M04574_2.00
Homo sapiens
TRGCGCCGGCGCYN

NRGCGCCGGCGCYA
SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_2
0.820 0.982
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCHOP00000002452 C2H2 ZF 182 204
ENSCHOP00000002452 C2H2 ZF 221 243
ENSCHOP00000002452 C2H2 ZF 249 271
ENSCHOP00000002452 C2H2 ZF 277 299
ENSCHOP00000002452 C2H2 ZF 305 327
ENSCHOP00000002452 C2H2 ZF 333 355
ENSCHOP00000002452 C2H2 ZF 361 383
ENSCHOP00000002452 C2H2 ZF 389 411
ENSCHOP00000002452 C2H2 ZF 417 439
ENSCHOP00000002452 C2H2 ZF 445 467
ENSCHOP00000002452 C2H2 ZF 473 495
ENSCHOP00000002452 C2H2 ZF 501 523

Links

Other C2H2 ZF family TFs
Other Choloepus hoffmanni TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSBTAP00000016859-D1 Bos grunniens ENSBTAP00000016859-D1 I 0.820
ENSCSAG00000008562 Chlorocebus sabaeus ENSCSAG00000008562 I 0.820
ENSMMUG00000008980 Macaca mulatta ENSMMUG00000008980 I 0.811
ENSMPUG00000000725 Mustela putorius furo ENSMPUG00000000725 I 0.818
ENSNLEG00000001430 Nomascus leucogenys ENSNLEG00000001430 I 0.820
ENSOARG00000004411 Ovis aries ENSOARG00000004411 I 0.819
ENSP00000326249 Macaca fascicularis ENSP00000326249 I 0.811
ENSPANG00000009509 Papio anubis ENSPANG00000009509 I 0.815
Zfp454 Mus musculus ENSMUSG00000048728 I 0.774
ZNF454 Tursiops truncatus ENSTTRG00000012880 I 0.816
ZNF454 Tupaia belangeri ENSTBEG00000000346 I 0.785
ZNF454 Sus scrofa ENSSSCG00000027351 I 0.791
ZNF454 Canis familiaris ENSCAFG00000031168 I 0.818
Znf454 Rattus norvegicus ENSRNOG00000022971 I 0.767
ZNF454 Pteropus vampyrus ENSPVAG00000007676 I 0.820
ZNF454 Pan troglodytes ENSPTRG00000017611 I 0.820
ZNF454 Homo sapiens ENSG00000178187 D 0.820
ZNF454 Ochotona princeps ENSOPRG00000009035 I 0.806
ZNF454 Oryctolagus cuniculus ENSOCUG00000029119 I 0.787
ZNF454 Callithrix jacchus ENSCJAG00000018857 I 0.819
ZNF454 Equus caballus ENSECAG00000005115 I 0.800
ZNF454 Erinaceus europaeus ENSEEUG00000007684 I 0.815
ZNF454 Felis catus ENSFCAG00000021971 I 0.816
ZNF454 Myotis lucifugus ENSMLUG00000002894 I 0.810
ZNF454 Gorilla gorilla ENSGGOG00000022508 I 0.820
ZNF454 Bos taurus ENSBTAG00000004262 I 0.820